Literature DB >> 17606639

Transcription termination factor Pcf11 limits the processivity of Pol II on an HIV provirus to repress gene expression.

Zhiqiang Zhang1, Alicia Klatt, Andrew J Henderson, David S Gilmour.   

Abstract

Many elongation factors in eukaryotes promote gene expression by increasing the processivity of RNA polymerase II (Pol II). However, the stability of RNA Pol II elongation complexes suggests that such complexes are not inherently prone to prematurely terminating transcription, particularly at physiological nucleotide concentrations. We show that the termination factor, Pcf11, causes premature termination on an HIV provirus. The transcription that occurs when Pcf11 is depleted from cells or an extract is no longer sensitive to 6-dichloro-1-beta-D-ribofuranosylbenzimidazole (DRB), a compound that causes premature termination. Hence, Pcf11 can act as a negative elongation factor to repress RNA Pol II gene expression in eukaryotic cells.

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Year:  2007        PMID: 17606639      PMCID: PMC1899470          DOI: 10.1101/gad.1542707

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  36 in total

1.  CD28-dependent HIV-1 transcription is associated with Vav, Rac, and NF-kappa B activation.

Authors:  Julie A Cook; Lee Albacker; Avery August; Andrew J Henderson
Journal:  J Biol Chem       Date:  2003-07-03       Impact factor: 5.157

Review 2.  Elongation by RNA polymerase II: the short and long of it.

Authors:  Robert J Sims; Rimma Belotserkovskaya; Danny Reinberg
Journal:  Genes Dev       Date:  2004-10-15       Impact factor: 11.361

3.  Anti-termination of transcription within the long terminal repeat of HIV-1 by tat gene product.

Authors:  S Y Kao; A F Calman; P A Luciw; B M Peterlin
Journal:  Nature       Date:  1987 Dec 3-9       Impact factor: 49.962

4.  A highly purified RNA polymerase II elongation control system.

Authors:  D B Renner; Y Yamaguchi; T Wada; H Handa; D H Price
Journal:  J Biol Chem       Date:  2001-09-11       Impact factor: 5.157

5.  Cytokine-induced expression of HIV-1 in a chronically infected promonocyte cell line.

Authors:  T M Folks; J Justement; A Kinter; C A Dinarello; A S Fauci
Journal:  Science       Date:  1987-11-06       Impact factor: 47.728

6.  Multiple discrete sites for premature RNA chain termination late in adenovirus-2 infection: enhancement by 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole.

Authors:  N W Fraser; P B Sehgal; J E Darnell
Journal:  Proc Natl Acad Sci U S A       Date:  1979-06       Impact factor: 11.205

7.  Attenuation of estrogen receptor alpha-mediated transcription through estrogen-stimulated recruitment of a negative elongation factor.

Authors:  Sarah E Aiyar; Jian-long Sun; Ashley L Blair; Christopher A Moskaluk; Yun-zhe Lu; Qi-Nong Ye; Yuki Yamaguchi; Amitava Mukherjee; Da-ming Ren; Hiroshi Handa; Rong Li
Journal:  Genes Dev       Date:  2004-09-01       Impact factor: 11.361

8.  Involvement of transcription termination factor 2 in mitotic repression of transcription elongation.

Authors:  Yan Jiang; Mingyi Liu; Charlotte A Spencer; David H Price
Journal:  Mol Cell       Date:  2004-05-07       Impact factor: 17.970

9.  Short capped hnRNA precursor chains in HeLa cells: continued synthesis in the presence of 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole.

Authors:  I Tamm; T Kikuchi; J E Darnell; M Salditt-Georgieff
Journal:  Biochemistry       Date:  1980-06-10       Impact factor: 3.162

10.  Genomic-scale measurement of mRNA turnover and the mechanisms of action of the anti-cancer drug flavopiridol.

Authors:  L T Lam; O K Pickeral; A C Peng; A Rosenwald; E M Hurt; J M Giltnane; L M Averett; H Zhao; R E Davis; M Sathyamoorthy; L M Wahl; E D Harris; J A Mikovits; A P Monks; M G Hollingshead; E A Sausville; L M Staudt
Journal:  Genome Biol       Date:  2001-09-13       Impact factor: 13.583

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  23 in total

1.  Negative elongation factor (NELF) coordinates RNA polymerase II pausing, premature termination, and chromatin remodeling to regulate HIV transcription.

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Journal:  J Biol Chem       Date:  2013-07-24       Impact factor: 5.157

2.  Functional coupling of last-intron splicing and 3'-end processing to transcription in vitro: the poly(A) signal couples to splicing before committing to cleavage.

Authors:  Frank Rigo; Harold G Martinson
Journal:  Mol Cell Biol       Date:  2007-10-29       Impact factor: 4.272

3.  Transcription termination by nuclear RNA polymerases.

Authors:  Patricia Richard; James L Manley
Journal:  Genes Dev       Date:  2009-06-01       Impact factor: 11.361

4.  Expression noise and acetylation profiles distinguish HDAC functions.

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Review 5.  Pol II waiting in the starting gates: Regulating the transition from transcription initiation into productive elongation.

Authors:  Sergei Nechaev; Karen Adelman
Journal:  Biochim Biophys Acta       Date:  2010-11-13

6.  NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila.

Authors:  Chanhyo Lee; Xiaoyong Li; Aaron Hechmer; Michael Eisen; Mark D Biggin; Bryan J Venters; Cizhong Jiang; Jian Li; B Franklin Pugh; David S Gilmour
Journal:  Mol Cell Biol       Date:  2008-03-10       Impact factor: 4.272

7.  Targeting IκB proteins for HIV latency activation: the role of individual IκB and NF-κB proteins.

Authors:  Guerau Fernandez; Thomas D Zaikos; Sohrab Z Khan; Ashley M Jacobi; Mark A Behlke; Steven L Zeichner
Journal:  J Virol       Date:  2013-01-30       Impact factor: 5.103

8.  Unique features of plant cleavage and polyadenylation specificity factor revealed by proteomic studies.

Authors:  Hongwei Zhao; Denghui Xing; Qingshun Quinn Li
Journal:  Plant Physiol       Date:  2009-09-11       Impact factor: 8.340

Review 9.  Promoter proximal pausing on genes in metazoans.

Authors:  David S Gilmour
Journal:  Chromosoma       Date:  2008-10-02       Impact factor: 4.316

Review 10.  Transcriptional control in the prereplicative phase of T4 development.

Authors:  Deborah M Hinton
Journal:  Virol J       Date:  2010-10-28       Impact factor: 4.099

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