Literature DB >> 17604148

Comparative studies on the diversity of the edible mushroom Pleurotus eryngii: ITS sequence analysis, RAPD fingerprinting, and physiological characteristics.

Hyeon-Su Ro1, Sung Soon Kim, Jae San Ryu, Che-Ok Jeon, Tae Soo Lee, Hyun-Sook Lee.   

Abstract

Verification of Pleurotus eryngii strains was assessed using ITS sequence analysis and RAPD fingerprinting. Sequence analysis of the ITS1-5.8S rDNA-ITS2 region of 24 strains of Pleurotus sp., which consisted of 22 strains of P. eryngii and the control strains P. ostreatus and P. ferulae, demonstrated that the DNA regions share mostly 99% sequence identity, indicating that sequence-based analysis is not applicable for the verification of closely related mushroom strains. To verify the mushroom strains using RAPD, we amplified DNA fragments from the total cellular DNA of 24 mushroom strains with 18 different random primers, yielding 538 distinct DNA fragments ranging from 200-4000bp. Analysis of the DNA fragment pattern showed that the 22 P. eryngii strains were clearly distinguished from the control strains P. ostreatus and P. ferulae, and could be categorized into five subgroups. Subsequent physiological studies on the development of fruiting bodies demonstrated the close correlation of the RAPD-based grouping with the phenotypical characteristics of mushroom fruiting bodies.

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Year:  2007        PMID: 17604148     DOI: 10.1016/j.mycres.2007.03.016

Source DB:  PubMed          Journal:  Mycol Res        ISSN: 0953-7562


  14 in total

1.  SCAR makers and multiplex PCR-based rapid molecular typing of Lentinula edodes strains.

Authors:  Xueqian Wu; Haibo Li; Weiwei Zhao; Lizhong Fu; Huazheng Peng; Liang He; Junwen Cheng; Hailong Wei; Qingqi Wu
Journal:  Curr Microbiol       Date:  2010-04-01       Impact factor: 2.188

2.  Phylogenetic relationship of two popular edible Pleurotus in China, Bailinggu (P. eryngii var. tuoliensis) and Xingbaogu (P. eryngii), determined by ITS, RPB2 and EF1α sequences.

Authors:  Xiao-Lan He; Bo Wu; Qian Li; Wei-Hong Peng; Zhong-Qian Huang; Bing-Cheng Gan
Journal:  Mol Biol Rep       Date:  2016-04-13       Impact factor: 2.316

3.  Evaluation of genetic diversity among Chinese Pleurotus eryngii cultivars by combined RAPD/ISSR marker.

Authors:  Shouxian Wang; Yonggang Yin; Yu Liu; Feng Xu
Journal:  Curr Microbiol       Date:  2012-07-04       Impact factor: 2.188

4.  Molecular classification and phylogenetic relationships of selected edible Basidiomycetes species.

Authors:  Farhat Ahmadi Avin; Subha Bhassu; Tan Yee Shin; Vikineswary Sabaratnam
Journal:  Mol Biol Rep       Date:  2012-02-11       Impact factor: 2.316

5.  Dietary effect of Pleurotus eryngii on biochemical function and histology in hypercholesterolemic rats.

Authors:  Nuhu Alam; Ki Nam Yoon; Jae Seong Lee; Hae Jin Cho; Mi Ja Shim; Tae Soo Lee
Journal:  Saudi J Biol Sci       Date:  2011-08-03       Impact factor: 4.219

6.  Genetic diversity of Pleurotus pulmonarius revealed by RAPD, ISSR, and SRAP fingerprinting.

Authors:  Yonggang Yin; Yu Liu; Huamin Li; Shuang Zhao; Shouxian Wang; Ying Liu; Di Wu; Feng Xu
Journal:  Curr Microbiol       Date:  2013-11-17       Impact factor: 2.188

7.  Retrotransposon microsatellite amplified polymorphism strain fingerprinting markers applicable to various mushroom species.

Authors:  Quy Vang Le; Hyo-Kyung Won; Tae-Soo Lee; Chang-Yun Lee; Hyun-Sook Lee; Hyeon-Su Ro
Journal:  Mycobiology       Date:  2008-09-30       Impact factor: 1.858

8.  MushBase: A Mushroom Information Database Application.

Authors:  Vang Quy Le; Hyun-Sook Lee; Hyeon-Su Ro
Journal:  Mycobiology       Date:  2007-09-30       Impact factor: 1.858

9.  Vegetative Growth and Phylogenetic Relationship of Commercially Cultivated Strains of Pleurotus eryngii based on ITS sequence and RAPD.

Authors:  Nuhu Alam; Mi Ja Shim; Min Woong Lee; Pyung Gyun Shin; Young Bok Yoo; Tae Soo Lee
Journal:  Mycobiology       Date:  2009-12-31       Impact factor: 1.858

10.  Phylogenetic Relationship in Different Commercial Strains of Pleurotus nebrodensis Based on ITS Sequence and RAPD.

Authors:  Nuhu Alam; Mi Ja Shim; Min Woong Lee; Pyeong Gyun Shin; Young Bok Yoo; Tae Soo Lee
Journal:  Mycobiology       Date:  2009-09-30       Impact factor: 1.858

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