Literature DB >> 17600727

STEM tomography in cell biology.

A E Yakushevska1, M N Lebbink, W J C Geerts, L Spek, E G van Donselaar, K A Jansen, B M Humbel, J A Post, A J Verkleij, A J Koster.   

Abstract

Transmission electron tomography has been used in biological sciences for quite some time and proven to be a valuable tool. However, to date, the different Scanning Transmission modes are almost not used for electron tomography on resin-embedded biological material. We explored different STEM modes on epon-embedded, osmium-uranyl-lead-stained biological material. Bright Field-TEM and High Angle Annular Dark Field-STEM tomograms from the same areas were recorded and compared. Contrast and signal-to-noise ratios were calculated. Template matching was used to validate results obtained in Bright Field-TEM and High Angle Annular Dark Field-STEM tomograms. It is concluded that High Angle Annular Dark Field-STEM gives a five times better contrast and signal-to-noise ratio than Bright Field-TEM. Template matching showed that 1.3 times more information could be extracted from High Angle Annular Dark Field-STEM tomograms than from Bright Field-TEM tomograms.

Entities:  

Mesh:

Year:  2007        PMID: 17600727     DOI: 10.1016/j.jsb.2007.04.006

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  23 in total

1.  Ultra-structural study of insulin granules in pancreatic β-cells of db/db mouse by scanning transmission electron microscopy tomography.

Authors:  Yanhong Xue; Wei Zhao; Wen Du; Xiang Zhang; Gang Ji; Wang Ying; Tao Xu
Journal:  Protein Cell       Date:  2012-07-10       Impact factor: 14.870

2.  Preparation of cryofixed cells for improved 3D ultrastructure with scanning transmission electron tomography.

Authors:  Katharina Höhn; Michaela Sailer; Li Wang; Myriam Lorenz; Marion E Schneider; Paul Walther
Journal:  Histochem Cell Biol       Date:  2010-11-27       Impact factor: 4.304

3.  Intracellular membrane traffic at high resolution.

Authors:  Jan R T van Weering; Edward Brown; Thomas H Sharp; Judith Mantell; Peter J Cullen; Paul Verkade
Journal:  Methods Cell Biol       Date:  2010       Impact factor: 1.441

4.  Comparison of 3D cellular imaging techniques based on scanned electron probes: Serial block face SEM vs. Axial bright-field STEM tomography.

Authors:  E L McBride; A Rao; G Zhang; J D Hoyne; G N Calco; B C Kuo; Q He; A A Prince; I D Pokrovskaya; B Storrie; A A Sousa; M A Aronova; R D Leapman
Journal:  J Struct Biol       Date:  2018-02-01       Impact factor: 2.867

Review 5.  Exploring photosynthesis by electron tomography.

Authors:  Martin F Hohmann-Marriott; Robert W Roberson
Journal:  Photosynth Res       Date:  2009 Nov-Dec       Impact factor: 3.573

6.  From gross anatomy to the nanomorphome: stereological tools provide a paradigm for advancing research in quantitative morphomics.

Authors:  Terry M Mayhew; John M Lucocq
Journal:  J Anat       Date:  2015-03-09       Impact factor: 2.610

7.  STEM tomography of high-pressure frozen and freeze-substituted cells: a comparison of image stacks obtained at 200 kV or 300 kV.

Authors:  Paul Walther; Andrea Bauer; Nadia Wenske; Alberto Catanese; Débora Garrido; Marion Schneider
Journal:  Histochem Cell Biol       Date:  2018-09-18       Impact factor: 4.304

8.  Cryo-scanning transmission electron tomography of vitrified cells.

Authors:  Sharon Grayer Wolf; Lothar Houben; Michael Elbaum
Journal:  Nat Methods       Date:  2014-02-16       Impact factor: 28.547

Review 9.  Development and application of STEM for the biological sciences.

Authors:  Alioscka A Sousa; Richard D Leapman
Journal:  Ultramicroscopy       Date:  2012-05-18       Impact factor: 2.689

10.  TOMOBFLOW: feature-preserving noise filtering for electron tomography.

Authors:  Jose-Jesus Fernandez
Journal:  BMC Bioinformatics       Date:  2009-06-12       Impact factor: 3.169

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