Literature DB >> 17596845

Definition of an electrostatic relay switch critical for the cAMP-dependent activation of protein kinase A as revealed by the D170A mutant of RIalpha.

Mona Abu-Abed1, Rahul Das, Lijun Wang, Giuseppe Melacini.   

Abstract

The Regulatory (R) subunit of Protein Kinase A (PKA) inhibits its kinase activity by shielding the Catalytic (C) subunit from physiological substrates. This inhibition is reversed in response to extra-cellular signals that increase cAMP levels in the cytoplasm. Upon cAMP binding to R, C is allosterically released from R, activating a spectrum of downstream signaling cascades. Crystallographic data indicated that a series of distinct conformational changes within CBD-A must occur to relay the cAMP signal from the cAMP binding site to the R:C interaction interface. One critical cAMP relay site within the CBD-A of R has been identified as Asp170 because the D170A mutation selectively reduces the negative cooperativity between the cAMP- and C-recognition sites (i.e. the KD for the R:C complex in the presence of cAMP is reduced by more than 12-fold), without significantly compromising the high affinity of R for both binding partners. Here, utilizing an integrated set of comparative NMR analyses we have elucidated how this critical electrostatic switch is able to control the interaction network which transmits the cAMP signal within CBD-A. The D170A-induced variations in backbone chemical shifts as well as in hydrogen-deuterium and hydrogen-hydrogen exchange profiles show that Asp170 not only plays a pivotal role in controlling the local conformation of the phosphate binding cassette (PBC), where cAMP docks, but also significantly affects the long-range cAMP-dependent interaction network that extends from the PBC to the three major sites of C-recognition. We also found that the D170A mutation promotes partial unfolding, thus assisting the uncoupling of the alpha- and beta-subdomains of CBD-A as required for the major alpha-helical conformational re-arrangement necessary for C-binding. Overall, the emerging map of allosteric networks features Asp170 as an essential component of an electrostatic switch mechanism that stabilizes the conformation of the PBC region for optimal interaction with cAMP and that is also crucial for relaying allosteric effects leading to C subunit activation. Taken together, our results consolidate the interdependence between the Asp170 relay site and the R:C interaction interface. Furthermore, they provide insight into the driving forces for the in vivo formation of intermediate PKA ternary complexes. Finally, our current study is relevant for elucidating the antagonistic properties of Rp-cAMPS on PKA by providing a detailed picture of the long-range effects of the altered interaction between this analog and the PBC. 2007 Wiley-Liss, Inc.

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Year:  2007        PMID: 17596845     DOI: 10.1002/prot.21446

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  17 in total

1.  Phosphodiesterases catalyze hydrolysis of cAMP-bound to regulatory subunit of protein kinase A and mediate signal termination.

Authors:  Balakrishnan Shenbaga Moorthy; Yunfeng Gao; Ganesh S Anand
Journal:  Mol Cell Proteomics       Date:  2010-10-05       Impact factor: 5.911

2.  Parallel Allostery by cAMP and PDE Coordinates Activation and Termination Phases in cAMP Signaling.

Authors:  Srinath Krishnamurthy; Nikhil Kumar Tulsian; Arun Chandramohan; Ganesh S Anand
Journal:  Biophys J       Date:  2015-08-11       Impact factor: 4.033

Review 3.  Signaling through cAMP and cAMP-dependent protein kinase: diverse strategies for drug design.

Authors:  Susan S Taylor; Choel Kim; Cecilia Y Cheng; Simon H J Brown; Jian Wu; Natarajan Kannan
Journal:  Biochim Biophys Acta       Date:  2007-10-12

4.  Dynamically driven ligand selectivity in cyclic nucleotide binding domains.

Authors:  Rahul Das; Somenath Chowdhury; Mohammad T Mazhab-Jafari; Soumita Sildas; Rajeevan Selvaratnam; Giuseppe Melacini
Journal:  J Biol Chem       Date:  2009-04-29       Impact factor: 5.157

5.  Communication between tandem cAMP binding domains in the regulatory subunit of protein kinase A-Ialpha as revealed by domain-silencing mutations.

Authors:  E Tyler McNicholl; Rahul Das; Soumita SilDas; Susan S Taylor; Giuseppe Melacini
Journal:  J Biol Chem       Date:  2010-03-04       Impact factor: 5.157

6.  Cyclic AMP-induced conformational changes in mycobacterial protein acetyltransferases.

Authors:  Subhalaxmi Nambi; Suguna Badireddy; Sandhya S Visweswariah; Ganesh S Anand
Journal:  J Biol Chem       Date:  2012-03-24       Impact factor: 5.157

7.  Role of Dynamics in the Autoinhibition and Activation of the Hyperpolarization-activated Cyclic Nucleotide-modulated (HCN) Ion Channels.

Authors:  Bryan VanSchouwen; Madoka Akimoto; Maryam Sayadi; Federico Fogolari; Giuseppe Melacini
Journal:  J Biol Chem       Date:  2015-05-04       Impact factor: 5.157

Review 8.  Role of conformational entropy in the activity and regulation of the catalytic subunit of protein kinase A.

Authors:  Gianluigi Veglia; Alessandro Cembran
Journal:  FEBS J       Date:  2013-08-27       Impact factor: 5.542

9.  Cyclic AMP analog blocks kinase activation by stabilizing inactive conformation: conformational selection highlights a new concept in allosteric inhibitor design.

Authors:  Suguna Badireddy; Gao Yunfeng; Mark Ritchie; Pearl Akamine; Jian Wu; Choel W Kim; Susan S Taylor; Lin Qingsong; Kunchithapadam Swaminathan; Ganesh S Anand
Journal:  Mol Cell Proteomics       Date:  2010-11-16       Impact factor: 5.911

10.  A mechanism for the auto-inhibition of hyperpolarization-activated cyclic nucleotide-gated (HCN) channel opening and its relief by cAMP.

Authors:  Madoka Akimoto; Zaiyong Zhang; Stephen Boulton; Rajeevan Selvaratnam; Bryan VanSchouwen; Melanie Gloyd; Eric A Accili; Oliver F Lange; Giuseppe Melacini
Journal:  J Biol Chem       Date:  2014-05-30       Impact factor: 5.157

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