Literature DB >> 17595079

What is the active species of cytochrome P450 during camphor hydroxylation? QM/MM studies of different electronic states of compound I and of reduced and oxidized iron-oxo intermediates.

Ahmet Altun1, Sason Shaik, Walter Thiel.   

Abstract

We have investigated C-H hydroxylation of camphor by Compound I (Cpd I) of cytochrome P450cam in different electronic states and by its one-electron reduced and oxidized forms, using QM/MM calculations in the native protein/solvent environment. Cpd I species with five unpaired electrons (pentaradicaloids) are ca. 12 kcal/mol higher in energy than the ground state Cpd I species with three unpaired electrons (triradicaloids). The H-abstraction transition states of pentaradicaloids lie ca. 21 (9) kcal/mol above the triradicaloid (pentaradicaloid) reactants. Hydroxylation via pentaradicaloids is thus facile provided that they can react before relaxing to the ground-state triradicaloids. Excited states of Cpd I with an Fe(V)-oxo moiety lie more than 20 kcal/mol above the triradicaloid ground state in single-point gas-phase calculations, but these electronic configurations are not stable upon including the point-charge protein environment which causes SCF convergence to the triradicaloid ground state. One-electron reduced species (Cpd II) show sluggish reactivity compared with Cpd I in agreement with experimental model studies. One-electron oxidized species are more reactive than Cpd I but seem too high in energy to be accessible. The barriers to hydrogen abstraction for the various forms of Cpd I are generally not affected much by the chosen protonation states of the Asp297 and His355 residues near the propionate side chains of the heme or by the appearance of radical character at Asp297, His355, or the propionates.

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Year:  2007        PMID: 17595079     DOI: 10.1021/ja066847y

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

1.  Exchange-enhanced reactivity in bond activation by metal-oxo enzymes and synthetic reagents.

Authors:  Sason Shaik; Hui Chen; Deepa Janardanan
Journal:  Nat Chem       Date:  2010-12-15       Impact factor: 24.427

2.  Identification of camphor oxidation and reduction products in Pseudomonas putida: new activity of the cytochrome P450cam system.

Authors:  Brinda Prasad; Adina Rojubally; Erika Plettner
Journal:  J Chem Ecol       Date:  2011-05-12       Impact factor: 2.626

3.  A GGA+U approach to effective electronic correlations in thiolate-ligated iron-oxo (IV) porphyrin.

Authors:  Justin E Elenewski; John C Hackett
Journal:  J Chem Phys       Date:  2012-09-28       Impact factor: 3.488

4.  Mechanistic insight from thermal activation parameters for oxygenation reactions of different substrates with biomimetic iron porphyrin models for compounds I and II.

Authors:  Christoph Fertinger; Alicja Franke; Rudi van Eldik
Journal:  J Biol Inorg Chem       Date:  2011-07-30       Impact factor: 3.358

5.  Spectroscopic and Reactivity Comparisons of a Pair of bTAML Complexes with FeV═O and FeIV═O Units.

Authors:  Santanu Pattanayak; Andrew J Jasniewski; Atanu Rana; Apparao Draksharapu; Kundan K Singh; Andrew Weitz; Michael Hendrich; Lawrence Que; Abhishek Dey; Sayam Sen Gupta
Journal:  Inorg Chem       Date:  2017-05-08       Impact factor: 5.165

6.  Cytochrome P450 compound I in the plane wave pseudopotential framework: GGA electronic and geometric structure of thiolate-ligated iron(IV)-oxo porphyrin.

Authors:  Justin E Elenewski; John C Hackett
Journal:  J Comput Chem       Date:  2013-05-14       Impact factor: 3.376

Review 7.  Hydrocarbon hydroxylation by cytochrome P450 enzymes.

Authors:  Paul R Ortiz de Montellano
Journal:  Chem Rev       Date:  2010-02-10       Impact factor: 60.622

8.  Replacement of tyrosine residues by phenylalanine in cytochrome P450cam alters the formation of Cpd II-like species in reactions with artificial oxidants.

Authors:  Tatyana Spolitak; John H Dawson; David P Ballou
Journal:  J Biol Inorg Chem       Date:  2008-05       Impact factor: 3.358

9.  Structures of prostacyclin synthase and its complexes with substrate analog and inhibitor reveal a ligand-specific heme conformation change.

Authors:  Yi-Ching Li; Chia-Wang Chiang; Hui-Chun Yeh; Pei-Yung Hsu; Frank G Whitby; Lee-Ho Wang; Nei-Li Chan
Journal:  J Biol Chem       Date:  2007-11-21       Impact factor: 5.157

10.  Mapping protein electron transfer pathways with QM/MM methods.

Authors:  Victor Guallar; Frank Wallrapp
Journal:  J R Soc Interface       Date:  2008-12-06       Impact factor: 4.118

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