Literature DB >> 17591936

Microfluidic chips for detecting the t(4;14) translocation and monitoring disease during treatment using reverse transcriptase-polymerase chain reaction analysis of IgH-MMSET hybrid transcripts.

Jaron VanDijken1, Govind V Kaigala, Jana Lauzon, Alexey Atrazhev, Sophia Adamia, Brian J Taylor, Tony Reiman, Andrew R Belch, Christopher J Backhouse, Linda M Pilarski.   

Abstract

Diagnosis platforms incorporating low-cost microfluidic chips enable sensitive, rapid, and accurate genetic analysis that could facilitate customized therapies tailored to match the vulnerabilities of any types of cancer. Using ex vivo cancer cells, we have detected the unique molecular signature and a chromosomal translocation in multiple myeloma. Multiple myeloma is characterized by IgH rearrangements and translocations that enable unequivocal identification of malignant cells, detected here with integrated microfluidic chips incorporating genetic amplification via reverse transcriptase-polymerase chain reaction and capillary electrophoresis. On microfluidic chips, we demonstrated accurate and versatile detection of molecular signatures in individual cancer cells, with value for monitoring response to therapy, detecting residual cancer cells that mediate relapse, and evaluating prognosis. Thus, testing for two clinically important molecular biomarkers, the IgH VDJ signature and hybrid transcripts signaling the t(4;14) chro-mosomal translocation, with predictive value in diagnosis, treatment decisions, and monitoring has been efficiently implemented on a miniaturized microfluidic system.

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Year:  2007        PMID: 17591936      PMCID: PMC1899427          DOI: 10.2353/jmoldx.2007.060149

Source DB:  PubMed          Journal:  J Mol Diagn        ISSN: 1525-1578            Impact factor:   5.568


  42 in total

1.  Integration of gene amplification and capillary gel electrophoresis on a polydimethylsiloxane-glass hybrid microchip.

Authors:  J W Hong; T Fujii; M Seki; T Yamamoto; I Endo
Journal:  Electrophoresis       Date:  2001-01       Impact factor: 3.535

2.  Solvent compatibility of poly(dimethylsiloxane)-based microfluidic devices.

Authors:  Jessamine Ng Lee; Cheolmin Park; George M Whitesides
Journal:  Anal Chem       Date:  2003-12-01       Impact factor: 6.986

3.  A nanoliter rotary device for polymerase chain reaction.

Authors:  Jian Liu; Markus Enzelberger; Stephen Quake
Journal:  Electrophoresis       Date:  2002-05       Impact factor: 3.535

4.  Solving the "world-to-chip" interface problem with a microfluidic matrix.

Authors:  Jian Liu; Carl Hansen; Stephen R Quake
Journal:  Anal Chem       Date:  2003-09-15       Impact factor: 6.986

5.  Microfabricated device for DNA and RNA amplification by continuous-flow polymerase chain reaction and reverse transcription-polymerase chain reaction with cycle number selection.

Authors:  Pierre J Obeid; Theodore K Christopoulos; H John Crabtree; Christopher J Backhouse
Journal:  Anal Chem       Date:  2003-01-15       Impact factor: 6.986

6.  Clinical evaluation of micro-scale chip-based PCR system for rapid detection of hepatitis B virus.

Authors:  Yoon-Kyoung Cho; Jintae Kim; Youngsun Lee; Young-A Kim; Kak Namkoong; Heekyun Lim; Kwang W Oh; Suhyeon Kim; Jungim Han; Chinsung Park; Y Eugene Pak; Chang-Seok Ki; Jong Rak Choi; Hyeon-Koon Myeong; Christopher Ko
Journal:  Biosens Bioelectron       Date:  2005-11-14       Impact factor: 10.618

7.  Parallel picoliter rt-PCR assays using microfluidics.

Authors:  Joshua S Marcus; W French Anderson; Stephen R Quake
Journal:  Anal Chem       Date:  2006-02-01       Impact factor: 6.986

8.  Real-time microchip PCR for detecting single-base differences in viral and human DNA.

Authors:  M S Ibrahim; R S Lofts; P B Jahrling; E A Henchal; V W Weedn; M A Northrup; P Belgrader
Journal:  Anal Chem       Date:  1998-05-01       Impact factor: 6.986

9.  Parallel nanoliter detection of cancer markers using polymer microchips.

Authors:  Anja Gulliksen; Lars Anders Solli; Klaus Stefan Drese; Olaf Sörensen; Frank Karlsen; Henrik Rogne; Eivind Hovig; Reidun Sirevåg
Journal:  Lab Chip       Date:  2005-01-28       Impact factor: 6.799

10.  In multiple myeloma, t(4;14)(p16;q32) is an adverse prognostic factor irrespective of FGFR3 expression.

Authors:  Jonathan J Keats; Tony Reiman; Christopher A Maxwell; Brian J Taylor; Loree M Larratt; Michael J Mant; Andrew R Belch; Linda M Pilarski
Journal:  Blood       Date:  2002-10-03       Impact factor: 22.113

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  5 in total

1.  Microfluidics in Malignant Glioma Research and Precision Medicine.

Authors:  Meghan Logun; Wujun Zhao; Leidong Mao; Lohitash Karumbaiah
Journal:  Adv Biosyst       Date:  2018-04-02

2.  A microfluidic platform for systems pathology: multiparameter single-cell signaling measurements of clinical brain tumor specimens.

Authors:  Jing Sun; Michael D Masterman-Smith; Nicholas A Graham; Jing Jiao; Jack Mottahedeh; Dan R Laks; Minori Ohashi; Jason DeJesus; Ken-ichiro Kamei; Ki-Bum Lee; Hao Wang; Zeta T F Yu; Yi-Tsung Lu; Shuang Hou; Keyu Li; Max Liu; Nangang Zhang; Shutao Wang; Brigitte Angenieux; Eduard Panosyan; Eric R Samuels; Jun Park; Dirk Williams; Vera Konkankit; David Nathanson; R Michael van Dam; Michael E Phelps; Hong Wu; Linda M Liau; Paul S Mischel; Jorge A Lazareff; Harley I Kornblum; William H Yong; Thomas G Graeber; Hsian-Rong Tseng
Journal:  Cancer Res       Date:  2010-07-14       Impact factor: 12.701

Review 3.  Microfabrication and applications of opto-microfluidic sensors.

Authors:  Daiying Zhang; Liqiu Men; Qiying Chen
Journal:  Sensors (Basel)       Date:  2011-05-18       Impact factor: 3.576

4.  Analysis of microsatellite instability in colorectal carcinoma by microfluidic-based chip electrophoresis.

Authors:  M Odenthal; N Barta; D Lohfink; U Drebber; F Schulze; H P Dienes; S E Baldus
Journal:  J Clin Pathol       Date:  2008-07-19       Impact factor: 3.411

Review 5.  Single Cell Isolation and Analysis.

Authors:  Ping Hu; Wenhua Zhang; Hongbo Xin; Glenn Deng
Journal:  Front Cell Dev Biol       Date:  2016-10-25
  5 in total

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