Literature DB >> 17585908

Identification and characterization of human ribokinase and comparison of its properties with E. coli ribokinase and human adenosine kinase.

Jae Park1, Paul van Koeverden, Bhag Singh, Radhey S Gupta.   

Abstract

The gene responsible for ribokinase (RK) in human/eukaryotic cells has not yet been identified/characterized. Blast searches with E. coli RK have identified a human protein showing significant similarity to the bacterial RK. The cDNA for this protein was expressed in E. coli and the recombinant protein efficiently phosphorylated ribose to ribose-5-phosphate using ATP, confirming its identity as RK. In contrast to ribose, the enzyme exhibited very little to no phosphorylation of D-arabinose, D-xylose, D-fructose and D-galactose. The catalytic activity of human RK was dependent upon the presence of inorganic phosphate, as observed previously for E. coli RK and mammalian adenosine kinases (AK). A number of activators and inhibitors of human AK, produced very similar effects on the human and E. coli RKs, indicating that the catalytic mechanism of RK is very similar to that of the AKs.

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Year:  2007        PMID: 17585908     DOI: 10.1016/j.febslet.2007.06.009

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  16 in total

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Authors:  Luigi J Alvarado; Regan M LeBlanc; Andrew P Longhini; Sarah C Keane; Niyati Jain; Zehra F Yildiz; Blanton S Tolbert; Victoria M D'Souza; Michael F Summers; Christoph Kreutz; T Kwaku Dayie
Journal:  Chembiochem       Date:  2014-06-20       Impact factor: 3.164

2.  A broad specificity nucleoside kinase from Thermoplasma acidophilum.

Authors:  Sarah R Elkin; Abhinav Kumar; Carol W Price; Linda Columbus
Journal:  Proteins       Date:  2013-01-17

3.  Positron emission tomography probe demonstrates a striking concentration of ribose salvage in the liver.

Authors:  Peter M Clark; Graciela Flores; Nikolai M Evdokimov; Melissa N McCracken; Timothy Chai; Evan Nair-Gill; Fiona O'Mahony; Simon W Beaven; Kym F Faull; Michael E Phelps; Michael E Jung; Owen N Witte
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-30       Impact factor: 11.205

4.  Identification of the Plant Ribokinase and Discovery of a Role for Arabidopsis Ribokinase in Nucleoside Metabolism.

Authors:  John W Riggs; Nathan C Rockwell; Philip C Cavales; Judy Callis
Journal:  J Biol Chem       Date:  2016-09-06       Impact factor: 5.157

5.  Expression, purification and analysis of the activity of enzymes from the pentose phosphate pathway.

Authors:  Patrick K Arthur; Luigi J Alvarado; T Kwaku Dayie
Journal:  Protein Expr Purif       Date:  2010-11-24       Impact factor: 1.650

Review 6.  Adenosine kinase: exploitation for therapeutic gain.

Authors:  Detlev Boison
Journal:  Pharmacol Rev       Date:  2013-04-16       Impact factor: 25.468

7.  Crystallization and preliminary X-ray analysis of a ribokinase from Vibrio cholerae O395.

Authors:  Rakhi Paul; Madhumita Dandopath Patra; Ramanuj Banerjee; Udayaditya Sen
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-07-23       Impact factor: 1.056

8.  An uncharacterized member of the ribokinase family in Thermococcus kodakarensis exhibits myo-inositol kinase activity.

Authors:  Takaaki Sato; Masahiro Fujihashi; Yukika Miyamoto; Keiko Kuwata; Eriko Kusaka; Haruo Fujita; Kunio Miki; Haruyuki Atomi
Journal:  J Biol Chem       Date:  2013-06-04       Impact factor: 5.157

9.  129Xe NMR-Protein Sensor Reveals Cellular Ribose Concentration.

Authors:  Serge D Zemerov; Benjamin W Roose; Kelsey L Farenhem; Zhuangyu Zhao; Madison A Stringer; Aaron R Goldman; David W Speicher; Ivan J Dmochowski
Journal:  Anal Chem       Date:  2020-09-23       Impact factor: 6.986

Review 10.  Adenosine kinase: A key regulator of purinergic physiology.

Authors:  Detlev Boison; Michael F Jarvis
Journal:  Biochem Pharmacol       Date:  2020-11-06       Impact factor: 5.858

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