Literature DB >> 17581584

The significance of nitrification for oceanic new production.

Andrew Yool1, Adrian P Martin, Camila Fernández, Darren R Clark.   

Abstract

The flux of organic material sinking to depth is a major control on the inventory of carbon in the ocean. To first order, the oceanic system is at equilibrium such that what goes down must come up. Because the export flux is difficult to measure directly, it is routinely estimated indirectly by quantifying the amount of phytoplankton growth, or primary production, fuelled by the upward flux of nitrate. To do so it is necessary to take into account other sources of biologically available nitrogen. However, the generation of nitrate by nitrification in surface waters has only recently received attention. Here we perform the first synthesis of open-ocean measurements of the specific rate of surface nitrification and use these to configure a global biogeochemical model to quantify the global role of nitrification. We show that for much of the world ocean a substantial fraction of the nitrate taken up is generated through recent nitrification near the surface. At the global scale, nitrification accounts for about half of the nitrate consumed by growing phytoplankton. A consequence is that many previous attempts to quantify marine carbon export, particularly those based on inappropriate use of the f-ratio (a measure of the efficiency of the 'biological pump'), are significant overestimates.

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Year:  2007        PMID: 17581584     DOI: 10.1038/nature05885

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  48 in total

1.  Seasonal Synechococcus and Thaumarchaeal population dynamics examined with high resolution with remote in situ instrumentation.

Authors:  Julie C Robidart; Christina M Preston; Ryan W Paerl; Kendra A Turk; Annika C Mosier; Christopher A Francis; Christopher A Scholin; Jonathan P Zehr
Journal:  ISME J       Date:  2011-10-06       Impact factor: 10.302

2.  Diversity, abundance, and spatial distribution of ammonia-oxidizing β-proteobacteria in sediments from Changjiang Estuary and its adjacent area in East China Sea.

Authors:  Yangyang Chen; Yu Zhen; Hui He; Xinglan Lu; Tiezhu Mi; Zhigang Yu
Journal:  Microb Ecol       Date:  2013-12-22       Impact factor: 4.552

3.  Prochlorococcus: approved for export.

Authors:  Zackary I Johnson; Yajuan Lin
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-24       Impact factor: 11.205

4.  Ammonia oxidation kinetics and temperature sensitivity of a natural marine community dominated by Archaea.

Authors:  Rachel E A Horak; Wei Qin; Andy J Schauer; E Virginia Armbrust; Anitra E Ingalls; James W Moffett; David A Stahl; Allan H Devol
Journal:  ISME J       Date:  2013-05-09       Impact factor: 10.302

5.  Marine archaeal dynamics and interactions with the microbial community over 5 years from surface to seafloor.

Authors:  Alma E Parada; Jed A Fuhrman
Journal:  ISME J       Date:  2017-07-21       Impact factor: 10.302

Review 6.  Microorganisms and ocean global change.

Authors:  David A Hutchins; Feixue Fu
Journal:  Nat Microbiol       Date:  2017-05-25       Impact factor: 17.745

7.  Nitrite oxidation in the upper water column and oxygen minimum zone of the eastern tropical North Pacific Ocean.

Authors:  J Michael Beman; Joy Leilei Shih; Brian N Popp
Journal:  ISME J       Date:  2013-06-27       Impact factor: 10.302

8.  Enrichment and characterization of ammonia-oxidizing archaea from the open ocean: phylogeny, physiology and stable isotope fractionation.

Authors:  Alyson E Santoro; Karen L Casciotti
Journal:  ISME J       Date:  2011-05-12       Impact factor: 10.302

9.  The marine nitrogen cycle: recent discoveries, uncertainties and the potential relevance of climate change.

Authors:  Maren Voss; Hermann W Bange; Joachim W Dippner; Jack J Middelburg; Joseph P Montoya; Bess Ward
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-05-27       Impact factor: 6.237

10.  Abundances of crenarchaeal amoA genes and transcripts in the Pacific Ocean.

Authors:  Matthew J Church; Brenner Wai; David M Karl; Edward F DeLong
Journal:  Environ Microbiol       Date:  2009-11-25       Impact factor: 5.491

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