Literature DB >> 17574836

Structures in systems biology.

Pedro Beltrao1, Christina Kiel, Luis Serrano.   

Abstract

Oil and water do not normally mix, and apparently structural biology and systems biology look like two different universes. It can be argued that structural biology could play a very important role in systems biology. Although at the final stage of understanding a signal transduction pathway, a cell, an organ or a living system, structures could be obviated, we need them to be able to reach that stage. Structures of macromolecules, especially molecular machines, could provide quantitative parameters, help to elucidate functional networks or enable rational designed perturbation experiments for reverse engineering. The role of structural biology in systems biology should be to provide enough understanding so that macromolecules can be translated into dots or even into equations devoid of atoms.

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Year:  2007        PMID: 17574836     DOI: 10.1016/j.sbi.2007.05.005

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  22 in total

Review 1.  Network integration and graph analysis in mammalian molecular systems biology.

Authors:  A Ma'ayan
Journal:  IET Syst Biol       Date:  2008-09       Impact factor: 1.615

2.  Structural principles within the human-virus protein-protein interaction network.

Authors:  Eric A Franzosa; Yu Xia
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-16       Impact factor: 11.205

Review 3.  Building Bridges Between Structural and Network-Based Systems Biology.

Authors:  Christos T Chasapis
Journal:  Mol Biotechnol       Date:  2019-03       Impact factor: 2.695

Review 4.  Modeling intracellular signaling underlying striatal function in health and disease.

Authors:  Anu G Nair; Omar Gutierrez-Arenas; Olivia Eriksson; Alexandra Jauhiainen; Kim T Blackwell; Jeanette H Kotaleski
Journal:  Prog Mol Biol Transl Sci       Date:  2014       Impact factor: 3.622

5.  Structural systems biology evaluation of metabolic thermotolerance in Escherichia coli.

Authors:  Roger L Chang; Kathleen Andrews; Donghyuk Kim; Zhanwen Li; Adam Godzik; Bernhard O Palsson
Journal:  Science       Date:  2013-06-07       Impact factor: 47.728

6.  Integrating Structural Information to Study the Dynamics of Protein-Protein Interactions in Cells.

Authors:  Bo Wang; Zhong-Ru Xie; Jiawen Chen; Yinghao Wu
Journal:  Structure       Date:  2018-08-30       Impact factor: 5.006

7.  Protein biomarkers for traumatic and ischemic brain injury: from bench to bedside.

Authors:  Zhiqun Zhang; Stefania Mondello; Firas Kobeissy; Richard Rubenstein; Jackson Streeter; Ronald L Hayes; Kevin K W Wang
Journal:  Transl Stroke Res       Date:  2011-12-07       Impact factor: 6.829

Review 8.  The Application of Proteomics to Traumatic Brain and Spinal Cord Injuries.

Authors:  George Anis Sarkis; Manasi D Mangaonkar; Ahmed Moghieb; Brian Lelling; Michael Guertin; Hamad Yadikar; Zhihui Yang; Firas Kobeissy; Kevin K W Wang
Journal:  Curr Neurol Neurosci Rep       Date:  2017-03       Impact factor: 5.081

9.  Systems medicine: the future of medical genomics and healthcare.

Authors:  Charles Auffray; Zhu Chen; Leroy Hood
Journal:  Genome Med       Date:  2009-01-20       Impact factor: 11.117

10.  Multi-level learning: improving the prediction of protein, domain and residue interactions by allowing information flow between levels.

Authors:  Kevin Y Yip; Philip M Kim; Drew McDermott; Mark Gerstein
Journal:  BMC Bioinformatics       Date:  2009-08-05       Impact factor: 3.169

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