Literature DB >> 17565975

In situ detection of phosphorylated platelet-derived growth factor receptor beta using a generalized proximity ligation method.

Malin Jarvius1, Janna Paulsson, Irene Weibrecht, Karl-Johan Leuchowius, Ann-Catrin Andersson, Carolina Wählby, Mats Gullberg, Johan Botling, Tobias Sjöblom, Boyka Markova, Arne Ostman, Ulf Landegren, Ola Söderberg.   

Abstract

Improved methods are needed for in situ characterization of post-translational modifications in cell lines and tissues. For example, it is desirable to monitor the phosphorylation status of individual receptor tyrosine kinases in samples from human tumors treated with inhibitors to evaluate therapeutic responses. Unfortunately the leading methods for observing the dynamics of tissue post-translational modifications in situ, immunohistochemistry and immunofluorescence, exhibit limited sensitivity and selectivity. Proximity ligation assay is a novel method that offers improved selectivity through the requirement of dual recognition and increased sensitivity by including DNA amplification as a component of detection of the target molecule. Here we therefore established a generalized in situ proximity ligation assay to investigate phosphorylation of platelet-derived growth factor receptor beta (PDGFRbeta) in cells stimulated with platelet-derived growth factor BB. Antibodies specific for immunoglobulins from different species, modified by attachment of DNA strands, were used as secondary proximity probes together with a pair of primary antibodies from the corresponding species. Dual recognition of receptors and phosphorylated sites by the primary antibodies in combination with the secondary proximity probes was used to generate circular DNA strands; this was followed by signal amplification by replicating the DNA circles via rolling circle amplification. We detected tyrosine phosphorylated PDGFRbeta in human embryonic kidney cells stably overexpressing human influenza hemagglutinin-tagged human PDGFRbeta in porcine aortic endothelial cells transfected with the beta-receptor, but not in cells transfected with the alpha-receptor, and also in immortalized human foreskin fibroblasts, BJ hTert, endogenously expressing the PDGFRbeta. We furthermore visualized tyrosine phosphorylated PDGFRbeta in tissue sections from fresh frozen human scar tissue undergoing wound healing. The method should be of great value to study signal transduction, screen for effects of pharmacological agents, and enhance the diagnostic potential in histopathology.

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Year:  2007        PMID: 17565975     DOI: 10.1074/mcp.M700166-MCP200

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  87 in total

Review 1.  DNA-protein interactions: methods for detection and analysis.

Authors:  Bipasha Dey; Sameer Thukral; Shruti Krishnan; Mainak Chakrobarty; Sahil Gupta; Chanchal Manghani; Vibha Rani
Journal:  Mol Cell Biochem       Date:  2012-03-08       Impact factor: 3.396

2.  Proximity ligation assay for high-content profiling of cell signaling pathways on a microfluidic chip.

Authors:  Matthias Blazek; Charles Betz; Michael Nip Hall; Michael Reth; Roland Zengerle; Matthias Meier
Journal:  Mol Cell Proteomics       Date:  2013-09-26       Impact factor: 5.911

3.  High content screening for inhibitors of protein interactions and post-translational modifications in primary cells by proximity ligation.

Authors:  Karl-Johan Leuchowius; Malin Jarvius; Malin Wickström; Linda Rickardson; Ulf Landegren; Rolf Larsson; Ola Söderberg; Mårten Fryknäs; Jonas Jarvius
Journal:  Mol Cell Proteomics       Date:  2009-10-27       Impact factor: 5.911

4.  Phenylalanine residues at the carboxyl terminus of the herpes simplex virus 1 UL20 membrane protein regulate cytoplasmic virion envelopment and infectious virus production.

Authors:  Anu-Susan Charles; Vladimir N Chouljenko; Nithya Jambunathan; Ramesh Subramanian; Peter Mottram; Konstantin G Kousoulas
Journal:  J Virol       Date:  2014-04-23       Impact factor: 5.103

5.  Multiplexed homogeneous proximity ligation assays for high-throughput protein biomarker research in serological material.

Authors:  Martin Lundberg; Stine Buch Thorsen; Erika Assarsson; Andrea Villablanca; Bonnie Tran; Nick Gee; Mick Knowles; Birgitte Sander Nielsen; Eduardo González Couto; Roberto Martin; Olle Nilsson; Christian Fermer; Jörg Schlingemann; Ib Jarle Christensen; Hans-Jorgen Nielsen; Björn Ekström; Claes Andersson; Mats Gustafsson; Nils Brunner; Jan Stenvang; Simon Fredriksson
Journal:  Mol Cell Proteomics       Date:  2011-01-17       Impact factor: 5.911

6.  Western blotting via proximity ligation for high performance protein analysis.

Authors:  Yanling Liu; Jijuan Gu; Åsa Hagner-McWhirter; Poojahrau Sathiyanarayanan; Mats Gullberg; Ola Söderberg; Johan Johansson; Maria Hammond; Daniel Ivansson; Ulf Landegren
Journal:  Mol Cell Proteomics       Date:  2011-08-02       Impact factor: 5.911

7.  Anchorage of VEGF to the extracellular matrix conveys differential signaling responses to endothelial cells.

Authors:  Tom T Chen; Alfonso Luque; Sunyoung Lee; Sean M Anderson; Tatiana Segura; M Luisa Iruela-Arispe
Journal:  J Cell Biol       Date:  2010-02-22       Impact factor: 10.539

8.  Detection of Receptor Heteromerization Using In Situ Proximity Ligation Assay.

Authors:  Ivone Gomes; Salvador Sierra; Lakshmi A Devi
Journal:  Curr Protoc Pharmacol       Date:  2016-12-13

9.  Monosomy of chromosome 10 associated with dysregulation of epidermal growth factor signaling in glioblastomas.

Authors:  Ajay K Yadav; Jaclyn J Renfrow; Denise M Scholtens; Hehuang Xie; George E Duran; Claudia Bredel; Hannes Vogel; James P Chandler; Arnab Chakravarti; Pierre A Robe; Sunit Das; Adrienne C Scheck; John A Kessler; Marcelo B Soares; Branimir I Sikic; Griffith R Harsh; Markus Bredel
Journal:  JAMA       Date:  2009-07-15       Impact factor: 56.272

10.  VEGF receptor 2/-3 heterodimers detected in situ by proximity ligation on angiogenic sprouts.

Authors:  Ingrid Nilsson; Fuad Bahram; Xiujuan Li; Laura Gualandi; Sina Koch; Malin Jarvius; Ola Söderberg; Andrey Anisimov; Ivana Kholová; Bronislaw Pytowski; Megan Baldwin; Seppo Ylä-Herttuala; Kari Alitalo; Johan Kreuger; Lena Claesson-Welsh
Journal:  EMBO J       Date:  2010-03-11       Impact factor: 11.598

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