Literature DB >> 17563367

Structural basis for recruitment of tandem hotdog domains in acyl-CoA thioesterase 7 and its role in inflammation.

Jade K Forwood1, Anil S Thakur, Gregor Guncar, Mary Marfori, Dmitri Mouradov, Weining Meng, Jodie Robinson, Thomas Huber, Stuart Kellie, Jennifer L Martin, David A Hume, Bostjan Kobe.   

Abstract

Acyl-CoA thioesterases (Acots) catalyze the hydrolysis of fatty acyl-CoA to free fatty acid and CoA and thereby regulate lipid metabolism and cellular signaling. We present a comprehensive structural and functional characterization of mouse acyl-CoA thioesterase 7 (Acot7). Whereas prokaryotic homologues possess a single thioesterase domain, mammalian Acot7 contains a pair of domains in tandem. We determined the crystal structures of both the N- and C-terminal domains of the mouse enzyme, and inferred the structure of the full-length enzyme using a combination of chemical cross-linking, mass spectrometry, and molecular modeling. The quaternary arrangement in Acot7 features a trimer of hotdog fold dimers. Both domains of Acot7 are required for activity, but only one of two possible active sites in the dimer is functional. Asn-24 and Asp-213 (from N- and C-domains, respectively) were identified as the catalytic residues through site-directed mutagenesis. An enzyme with higher activity than wild-type Acot7 was obtained by mutating the residues in the nonfunctional active site. Recombinant Acot7 was shown to have the highest activity toward arachidonoyl-CoA, suggesting a function in eicosanoid metabolism. In line with the proposal, Acot7 was shown to be highly expressed in macrophages and up-regulated by lipopolysaccharide. Overexpression of Acot7 in a macrophage cell line modified the production of prostaglandins D2 and E2. Together, the results link the molecular and cellular functions of Acot7 and identify the enzyme as a candidate drug target in inflammatory disease.

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Year:  2007        PMID: 17563367      PMCID: PMC1965522          DOI: 10.1073/pnas.0700974104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  40 in total

1.  Aberrant cytosolic acyl-CoA thioester hydrolase in hippocampus of patients with mesial temporal lobe epilepsy.

Authors:  J W Yang; T Czech; J Yamada; E Csaszar; C Baumgartner; I Slavc; G Lubec
Journal:  Amino Acids       Date:  2004-12-02       Impact factor: 3.520

Review 2.  Inhibitors of brain phospholipase A2 activity: their neuropharmacological effects and therapeutic importance for the treatment of neurologic disorders.

Authors:  Akhlaq A Farooqui; Wei-Yi Ong; Lloyd A Horrocks
Journal:  Pharmacol Rev       Date:  2006-09       Impact factor: 25.468

3.  Crystal structure of the Escherichia coli thioesterase II, a homolog of the human Nef binding enzyme.

Authors:  J Li; U Derewenda; Z Dauter; S Smith; Z S Derewenda
Journal:  Nat Struct Biol       Date:  2000-07

4.  Purification and properties of long-chain acyl-CoA hydrolases from the liver cytosol of rats treated with peroxisome proliferator.

Authors:  J Yamada; I Matsumoto; T Furihata; M Sakuma; T Suga
Journal:  Arch Biochem Biophys       Date:  1994-01       Impact factor: 4.013

5.  Induction of a novel long-chain acyl-CoA hydrolase in rat liver by administration of peroxisome proliferators.

Authors:  S Miyazawa; S Furuta; T Hashimoto
Journal:  Eur J Biochem       Date:  1981-07

6.  Molecular cloning and characterization of two mouse peroxisome proliferator-activated receptor alpha (PPARalpha)-regulated peroxisomal acyl-CoA thioesterases.

Authors:  Maria A K Westin; Stefan E H Alexson; Mary C Hunt
Journal:  J Biol Chem       Date:  2004-03-08       Impact factor: 5.157

7.  D-glyceraldehyde-3-phosphate dehydrogenase: pre-existent asymmetry of the tetramer and its functional implications.

Authors:  N K Nagradova; E V Kuzminskaya; R A Asryants
Journal:  Biotechnol Appl Biochem       Date:  1993-10       Impact factor: 2.431

8.  Long-chain acyl-CoA hydrolase from rat brain cytosol: purification, characterization, and immunohistochemical localization.

Authors:  J Yamada; T Furihata; H Tamura; T Watanabe; T Suga
Journal:  Arch Biochem Biophys       Date:  1996-02-01       Impact factor: 4.013

9.  Continued discovery of transcriptional units expressed in cells of the mouse mononuclear phagocyte lineage.

Authors:  Christine A Wells; Timothy Ravasi; Razvan Sultana; Ken Yagi; Piero Carninci; Hidemasa Bono; Geoffrey Faulkner; Yasushi Okazaki; John Quackenbush; David A Hume; Paul A Lyons
Journal:  Genome Res       Date:  2003-06       Impact factor: 9.043

10.  The Hotdog fold: wrapping up a superfamily of thioesterases and dehydratases.

Authors:  Shane C Dillon; Alex Bateman
Journal:  BMC Bioinformatics       Date:  2004-08-12       Impact factor: 3.169

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  37 in total

Review 1.  Thioesterases: a new perspective based on their primary and tertiary structures.

Authors:  David C Cantu; Yingfei Chen; Peter J Reilly
Journal:  Protein Sci       Date:  2010-07       Impact factor: 6.725

2.  Application of a high-throughput fluorescent acetyltransferase assay to identify inhibitors of homocitrate synthase.

Authors:  Stacie L Bulfer; Thomas J McQuade; Martha J Larsen; Raymond C Trievel
Journal:  Anal Biochem       Date:  2010-11-10       Impact factor: 3.365

3.  Methods for Molecular Modelling of Protein Complexes.

Authors:  Tejashree Rajaram Kanitkar; Neeladri Sen; Sanjana Nair; Neelesh Soni; Kaustubh Amritkar; Yogendra Ramtirtha; M S Madhusudhan
Journal:  Methods Mol Biol       Date:  2021

4.  Targeted deletion of thioesterase superfamily member 1 promotes energy expenditure and protects against obesity and insulin resistance.

Authors:  Yongzhao Zhang; Yingxia Li; Michele W Niepel; Yuki Kawano; Shuxin Han; Sihao Liu; Alessandro Marsili; P Reed Larsen; Chih-Hao Lee; David E Cohen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-16       Impact factor: 11.205

5.  Proteome profiling of spinal cord and dorsal root ganglia in rats with trinitrobenzene sulfonic acid-induced colitis.

Authors:  Xiao-Jun Zhang; Feung Ping Leung; Wendy Wl Hsiao; Shun Tan; Shao Li; Hong-Xi Xu; Joseph Jy Sung; Zhao-Xiang Bian
Journal:  World J Gastroenterol       Date:  2012-06-21       Impact factor: 5.742

6.  Crystallization and preliminary X-ray diffraction analysis of FabG from Yersinia pestis.

Authors:  Jeffrey David Nanson; Jade Kenneth Forwood
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2013-12-24       Impact factor: 1.056

7.  Thioesterase superfamily member 2/acyl-CoA thioesterase 13 (Them2/Acot13) regulates hepatic lipid and glucose metabolism.

Authors:  Hye Won Kang; Michele W Niepel; Shuxin Han; Yuki Kawano; David E Cohen
Journal:  FASEB J       Date:  2012-02-17       Impact factor: 5.191

8.  Acyl coenzyme A thioesterase 7 regulates neuronal fatty acid metabolism to prevent neurotoxicity.

Authors:  Jessica M Ellis; G William Wong; Michael J Wolfgang
Journal:  Mol Cell Biol       Date:  2013-03-04       Impact factor: 4.272

9.  Crystal structure of human mitochondrial acyl-CoA thioesterase (ACOT2).

Authors:  Corey R Mandel; Benjamin Tweel; Liang Tong
Journal:  Biochem Biophys Res Commun       Date:  2009-06-02       Impact factor: 3.575

10.  Analysis of proteins with the 'hot dog' fold: prediction of function and identification of catalytic residues of hypothetical proteins.

Authors:  Lakshmi S Pidugu; Koustav Maity; Karthikeyan Ramaswamy; Namita Surolia; Kaza Suguna
Journal:  BMC Struct Biol       Date:  2009-05-28
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