Literature DB >> 17562476

WASABI: an automated sequence processing system for multigene phylogenies.

Frank Kauff1, Cymon J Cox, François Lutzoni.   

Abstract

Mesh:

Year:  2007        PMID: 17562476     DOI: 10.1080/10635150701395340

Source DB:  PubMed          Journal:  Syst Biol        ISSN: 1063-5157            Impact factor:   15.683


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  9 in total

1.  Dolabra nepheliae on rambutan and lychee represents a novel lineage of phytopathogenic Eurotiomycetes.

Authors:  Amy Y Rossman; Conrad L Schoch; David F Farr; Kate Nishijima; Lisa Keith; Ricardo Goenaga
Journal:  Mycoscience       Date:  2010-07-01       Impact factor: 1.223

2.  Biopython: freely available Python tools for computational molecular biology and bioinformatics.

Authors:  Peter J A Cock; Tiago Antao; Jeffrey T Chang; Brad A Chapman; Cymon J Cox; Andrew Dalke; Iddo Friedberg; Thomas Hamelryck; Frank Kauff; Bartek Wilczynski; Michiel J L de Hoon
Journal:  Bioinformatics       Date:  2009-03-20       Impact factor: 6.937

3.  A class-wide phylogenetic assessment of Dothideomycetes.

Authors:  C L Schoch; P W Crous; J Z Groenewald; E W A Boehm; T I Burgess; J de Gruyter; G S de Hoog; L J Dixon; M Grube; C Gueidan; Y Harada; S Hatakeyama; K Hirayama; T Hosoya; S M Huhndorf; K D Hyde; E B G Jones; J Kohlmeyer; A Kruys; Y M Li; R Lücking; H T Lumbsch; L Marvanová; J S Mbatchou; A H McVay; A N Miller; G K Mugambi; L Muggia; M P Nelsen; P Nelson; C A Owensby; A J L Phillips; S Phongpaichit; S B Pointing; V Pujade-Renaud; H A Raja; E Rivas Plata; B Robbertse; C Ruibal; J Sakayaroj; T Sano; L Selbmann; C A Shearer; T Shirouzu; B Slippers; S Suetrong; K Tanaka; B Volkmann-Kohlmeyer; M J Wingfield; A R Wood; J H C Woudenberg; H Yonezawa; Y Zhang; J W Spatafora
Journal:  Stud Mycol       Date:  2009       Impact factor: 16.097

4.  A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families.

Authors:  Jolanta Miadlikowska; Frank Kauff; Filip Högnabba; Jeffrey C Oliver; Katalin Molnár; Emily Fraker; Ester Gaya; Josef Hafellner; Valérie Hofstetter; Cécile Gueidan; Mónica A G Otálora; Brendan Hodkinson; Martin Kukwa; Robert Lücking; Curtis Björk; Harrie J M Sipman; Ana Rosa Burgaz; Arne Thell; Alfredo Passo; Leena Myllys; Trevor Goward; Samantha Fernández-Brime; Geir Hestmark; James Lendemer; H Thorsten Lumbsch; Michaela Schmull; Conrad L Schoch; Emmanuël Sérusiaux; David R Maddison; A Elizabeth Arnold; François Lutzoni; Soili Stenroos
Journal:  Mol Phylogenet Evol       Date:  2014-04-18       Impact factor: 4.286

5.  The first report of polymorphisms and genetic characteristics of the prion protein gene (PRNP) in horses.

Authors:  Yong-Chan Kim; Byung-Hoon Jeong
Journal:  Prion       Date:  2018-09-12       Impact factor: 3.931

Review 6.  Scaling up discovery of hidden diversity in fungi: impacts of barcoding approaches.

Authors:  Rebecca Yahr; Conrad L Schoch; Bryn T M Dentinger
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-09-05       Impact factor: 6.237

7.  Multi-locus phylogeny of Pleosporales: a taxonomic, ecological and evolutionary re-evaluation.

Authors:  Y Zhang; C L Schoch; J Fournier; P W Crous; J de Gruyter; J H C Woudenberg; K Hirayama; K Tanaka; S B Pointing; J W Spatafora; K D Hyde
Journal:  Stud Mycol       Date:  2009       Impact factor: 16.097

8.  FUNYBASE: a FUNgal phYlogenomic dataBASE.

Authors:  Sylvain Marthey; Gabriela Aguileta; François Rodolphe; Annie Gendrault; Tatiana Giraud; Elisabeth Fournier; Manuela Lopez-Villavicencio; Angélique Gautier; Marc-Henri Lebrun; Hélène Chiapello
Journal:  BMC Bioinformatics       Date:  2008-10-27       Impact factor: 3.169

9.  Bio.Phylo: a unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biopython.

Authors:  Eric Talevich; Brandon M Invergo; Peter J A Cock; Brad A Chapman
Journal:  BMC Bioinformatics       Date:  2012-08-21       Impact factor: 3.169

  9 in total

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