Literature DB >> 17562451

The weird and wonderful world of bacterial ribosome regulation.

Daniel N Wilson1, Knud H Nierhaus.   

Abstract

In every organism, translation of the genetic information into functional proteins is performed on the ribosome. In Escherichia coli up to 40% of the cell's total energy turnover is channelled toward the ribosome and protein synthesis. Thus, elaborate networks of translation regulation pathways have evolved to modulate gene expression in response to growth rate and external factors, ranging from nutrient deprivation, to chemical (pH, ionic strength) and physical (temperature) fluctuations. Since the fundamental players involved in regulation of the different phases of translation have already been extensively reviewed elsewhere, this review focuses on lesser known and characterized factors that regulate the ribosome, ranging from processing, modification and assembly factors, unusual initiation and elongation factors, to a variety of stress response proteins.

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Year:  2007        PMID: 17562451     DOI: 10.1080/10409230701360843

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  99 in total

1.  Biochemical characterization of ribosome assembly GTPase RbgA in Bacillus subtilis.

Authors:  David Achila; Megha Gulati; Nikhil Jain; Robert A Britton
Journal:  J Biol Chem       Date:  2012-01-20       Impact factor: 5.157

2.  Cryo-electron microscopy structure of the 30S subunit in complex with the YjeQ biogenesis factor.

Authors:  Ahmad Jomaa; Geordie Stewart; Jason A Mears; Inga Kireeva; Eric D Brown; Joaquin Ortega
Journal:  RNA       Date:  2011-09-29       Impact factor: 4.942

3.  RsgA releases RbfA from 30S ribosome during a late stage of ribosome biosynthesis.

Authors:  Simon Goto; Shingo Kato; Takatsugu Kimura; Akira Muto; Hyouta Himeno
Journal:  EMBO J       Date:  2010-11-23       Impact factor: 11.598

Review 4.  Inhibition of bacterial ribosome assembly: a suitable drug target?

Authors:  Bruce A Maguire
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

5.  Elucidation of separate, but collaborative functions of the rRNA methyltransferase-related human mitochondrial transcription factors B1 and B2 in mitochondrial biogenesis reveals new insight into maternally inherited deafness.

Authors:  Justin Cotney; Sharen E McKay; Gerald S Shadel
Journal:  Hum Mol Genet       Date:  2009-05-05       Impact factor: 6.150

Review 6.  Biophysical studies of bacterial ribosome assembly.

Authors:  James R Williamson
Journal:  Curr Opin Struct Biol       Date:  2008-06-07       Impact factor: 6.809

7.  Adaptation of Escherichia coli to elevated sodium concentrations increases cation tolerance and enables greater lactic acid production.

Authors:  Xianghao Wu; Ronni Altman; Mark A Eiteman; Elliot Altman
Journal:  Appl Environ Microbiol       Date:  2014-02-28       Impact factor: 4.792

8.  Structural aspects of RbfA action during small ribosomal subunit assembly.

Authors:  Partha P Datta; Daniel N Wilson; Masahito Kawazoe; Neil K Swami; Tatsuya Kaminishi; Manjuli R Sharma; Timothy M Booth; Chie Takemoto; Paola Fucini; Shigeyuki Yokoyama; Rajendra K Agrawal
Journal:  Mol Cell       Date:  2007-11-09       Impact factor: 17.970

9.  Measuring the dynamics of E. coli ribosome biogenesis using pulse-labeling and quantitative mass spectrometry.

Authors:  Stephen S Chen; Edit Sperling; Josh M Silverman; Joseph H Davis; James R Williamson
Journal:  Mol Biosyst       Date:  2012-10-30

10.  Comparative proteomic analysis of silkworm fat body after knocking out fibroin heavy chain gene: a novel insight into cross-talk between tissues.

Authors:  Quanmei Chen; Zhengang Ma; Xin Wang; Zhiqing Li; Yan Zhang; Sanyuan Ma; Ping Zhao; Qingyou Xia
Journal:  Funct Integr Genomics       Date:  2015-08-18       Impact factor: 3.410

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