Literature DB >> 17560778

Controlling the surface density of DNA on gold by electrically induced desorption.

Kenji Arinaga1, Ulrich Rant, Jelena Knezević, Erika Pringsheim, Marc Tornow, Shozo Fujita, Gerhard Abstreiter, Naoki Yokoyama.   

Abstract

We report on a method to control the packing density of sulfur-bound oligonucleotide layers on metal electrodes by electrical means. In a first step, a dense nucleic acid layer is deposited by self-assembly from solution; in a second step, defined fractions of DNA molecules are released from the surface by applying a series of negative voltage cycles. Systematic investigations of the influence of the applied electrode potentials and oligonucleotide length allow us to identify a sharp desorption onset at -0.65 V versus Ag/AgCl, which is independent of the DNA length. Moreover, our results clearly show the pronounced influence of competitive adsorbents in solution on the desorption behavior, which can prevent the re-adsorption of released DNA molecules, thereby enhancing the desorption efficiency. The method is fully bio-compatible and can be employed to improve the functionality of DNA layers. This is demonstrated in hybridization experiments revealing almost perfect yields for electrically "diluted" DNA layers. The proposed control method is extremely beneficial to the field of DNA-based sensors.

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Year:  2007        PMID: 17560778     DOI: 10.1016/j.bios.2007.04.012

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  8 in total

1.  An electrostatic model for DNA surface hybridization.

Authors:  Ian Y Wong; Nicholas A Melosh
Journal:  Biophys J       Date:  2010-06-16       Impact factor: 4.033

2.  Switchable DNA interfaces for the highly sensitive detection of label-free DNA targets.

Authors:  Ulrich Rant; Kenji Arinaga; Simon Scherer; Erika Pringsheim; Shozo Fujita; Naoki Yokoyama; Marc Tornow; Gerhard Abstreiter
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-19       Impact factor: 11.205

3.  Platform for in situ real-time measurement of protein-induced conformational changes of DNA.

Authors:  Philipp S Spuhler; Jelena Knezevic; Ayça Yalçin; Qiuye Bao; Erika Pringsheim; Peter Dröge; Ulrich Rant; M Selim Unlü
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-04       Impact factor: 11.205

4.  Electrochemical Characteristics of a DNA Modified Electrode as a Function of Percent Binding.

Authors:  Rahul Tevatia; Abhijeet Prasad; Ravi F Saraf
Journal:  Anal Chem       Date:  2019-07-30       Impact factor: 8.008

5.  Protein analysis by time-resolved measurements with an electro-switchable DNA chip.

Authors:  Andreas Langer; Paul A Hampel; Wolfgang Kaiser; Jelena Knezevic; Thomas Welte; Valentina Villa; Makiko Maruyama; Matej Svejda; Simone Jähner; Frank Fischer; Ralf Strasser; Ulrich Rant
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

6.  Spatiotemporal control of DNA-based chemical reaction network via electrochemical activation in microfluidics.

Authors:  Ievgen Kurylo; Guillaume Gines; Yannick Rondelez; Yannick Coffinier; Alexis Vlandas
Journal:  Sci Rep       Date:  2018-04-23       Impact factor: 4.379

7.  Application of the SwitchSense Technique for the Study of Small Molecules' (Ethidium Bromide and Selected Sulfonamide Derivatives) Affinity to DNA in Real Time.

Authors:  Sandra Ramotowska; Paulina Spisz; Jakub Brzeski; Aleksandra Ciesielska; Mariusz Makowski
Journal:  J Phys Chem B       Date:  2022-09-15       Impact factor: 3.466

8.  Effects of Experimental Conditions on the Signaling Fidelity of Impedance-Based Nucleic Acid Sensors.

Authors:  Vasileia Vogiazi; Armah de la Cruz; William R Heineman; Ryan J White; Dionysios D Dionysiou
Journal:  Anal Chem       Date:  2021-01-04       Impact factor: 6.986

  8 in total

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