Literature DB >> 17553638

Functional diversification of kir7.1 in cichlids accelerated by gene duplication.

Masakatsu Watanabe1, Kazue Hiraide, Norihiro Okada.   

Abstract

Mutation in the inward rectifier potassium channel gene, kir7.1, was previously identified as being responsible for the broader stripe zebrafish skin pattern mutant, jaguar/obelix. An amino acid substitution in this channel causes a broader stripe pattern than that of wild type zebrafish. In this study we analyzed cichlid homologs of the zebrafish kir7.1 gene. We identified two kinds of homologous genes in cichlids and named them cikir7.1 and cikir7.2. Southern hybridization using cichlid genome revealed that cichlids from the African Great Lakes, South America and Madagascar have two copies of the gene. Cichlids from Sri Lanka, however, showed only one band in this experiment. Database analysis revealed that only one copy of the kir7.1 gene exists in the genomes of the teleosts zebrafish, tetraodon, takifugu, medaka and stickleback. The deduced amino acid sequence of cikir7.1 is highly conserved among African cichlids, whereas that of cikir7.2 has several amino acid substitutions even in conserved transmembrane domains. Gene expression analysis revealed that cikir7.1 is expressed specifically in brain and eye, and cikir7.2 in testis and ovary; zebrafish kir7.1, however, is expressed in brain, eye, skin, caudal fin, testis and ovary. These results suggest that gene duplication of the cichlid kir7.1 occurred in a common ancestor of the family Cichlidae, that the function of parental kir7.1 was then divided into two genes, cikir7.1 and cikir7.2, and that the evolutionary rate of cikir7.2 might have been accelerated, thereby effecting functional diversification in the cichlid lineage. Thus, the evolution of kir7.1 genes in cichlids provides a typical example of gene duplication--one gene is conserved while the other becomes specialized for a novel function.

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Year:  2007        PMID: 17553638     DOI: 10.1016/j.gene.2007.04.024

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  5 in total

1.  The Genomic Substrate for Adaptive Radiation: Copy Number Variation across 12 Tribes of African Cichlid Species.

Authors:  Joshua J Faber-Hammond; Etienne Bezault; David H Lunt; Domino A Joyce; Suzy C P Renn
Journal:  Genome Biol Evol       Date:  2019-10-01       Impact factor: 3.416

2.  Evolution of the potassium channel gene Kcnj13 underlies colour pattern diversification in Danio fish.

Authors:  Marco Podobnik; Hans Georg Frohnhöfer; Christopher M Dooley; Anastasia Eskova; Christiane Nüsslein-Volhard; Uwe Irion
Journal:  Nat Commun       Date:  2020-12-04       Impact factor: 14.919

3.  Phylogenomics of trophically diverse cichlids disentangles processes driving adaptive radiation and repeated trophic transitions.

Authors:  Pooja Singh; Iker Irisarri; Julián Torres-Dowdall; Gerhard G Thallinger; Hannes Svardal; Emily Moriarty Lemmon; Alan R Lemmon; Stephan Koblmüller; Axel Meyer; Christian Sturmbauer
Journal:  Ecol Evol       Date:  2022-07-17       Impact factor: 3.167

Review 4.  Colour variation in cichlid fish: developmental mechanisms, selective pressures and evolutionary consequences.

Authors:  Martine E Maan; Kristina M Sefc
Journal:  Semin Cell Dev Biol       Date:  2013-05-09       Impact factor: 7.727

Review 5.  Carotenoid-based coloration in cichlid fishes.

Authors:  Kristina M Sefc; Alexandria C Brown; Ethan D Clotfelter
Journal:  Comp Biochem Physiol A Mol Integr Physiol       Date:  2014-03-22       Impact factor: 2.320

  5 in total

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