| Literature DB >> 17553250 |
Brian R Amman1, Boris I Pavlin, Cesar G Albariño, James A Comer, Bobbie R Erickson, Jennifer B Oliver, Tara K Sealy, Martin J Vincent, Stuart T Nichol, Christopher D Paddock, Abbigail J Tumpey, Kent D Wagoner, R David Glauer, Kathleen A Smith, Kim A Winpisinger, Melody S Parsely, Phil Wyrick, Christopher H Hannafin, Utpala Bandy, Sherif Zaki, Pierre E Rollin, Thomas G Ksiazek.
Abstract
In April 2005, 4 transplant recipients became ill after receiving organs infected with lymphocytic choriomeningitis virus (LCMV); 3 subsequently died. All organs came from a donor who had been exposed to a hamster infected with LCMV. The hamster was traced back through a Rhode Island pet store to a distribution center in Ohio, and more LCMV-infected hamsters were discovered in both. Rodents from the Ohio facility and its parent facility in Arkansas were tested for the same LCMV strain as the 1 involved in the transplant-associated deaths. Phylogenetic analysis of virus sequences linked the rodents from the Ohio facility to the Rhode Island pet store, the index hamster, and the transplant recipients. This report details the animal traceback and the supporting laboratory investigations.Entities:
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Year: 2007 PMID: 17553250 PMCID: PMC2738461 DOI: 10.3201/eid1305.061269
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Estimated population sizes and samples taken from 2 rodent distribution facilities
| Location | Species | Population size | Projected prevalence, % | Sample size | Probability of detecting a positive, % |
|---|---|---|---|---|---|
| Ohio | Syrian hamsters | 5,000 | 5.0 | 116 | 99.8 |
| Arkansas | Fancy rats | >10,000 | 3.4 | 125 | 98.7 |
| Arkansas | Fancy mice | 200 | 3.4 | 75 | 96.5 |
| Arkansas | Gerbils | 2,500 | 3.4 | 125 | 98.8 |
| Arkansas | Dwarf hamsters | 3,750 | 3.4 | 113* | 98.1 |
| Arkansas | Roborovsky dwarf hamster | 140 | 3.4 | 12† | 36.5 |
*Sample size after removal of 12 Roborovsky hamsters from requested sample size. †Sample size represents an agreed-upon portion of the total population.
Results of laboratory testing on the index hamster and traceback rodents associated with organ transplantation transmission of LCMV*
| Rodent† | IFA | ELISA | IHC | RT-PCR/ TaqMan | Virus isolation | Sequence (L gene) |
|---|---|---|---|---|---|---|
| Index hamster | ND | Neg | Pos | Pos | Pos | 232 bp |
| Pet store hamster 1 | Pos | Neg | Pos | Pos | Pos | 232 bp |
| Pet store hamster 2 | Neg | Neg | Pos | Pos | Pos | 232 bp |
| Pet store guinea pig 1 | ND | Neg | Pos | Pos | Pos | 232 bp |
| Ohio hamster 1 | Pos | Neg | Pos | Pos | Pos | 232 bp |
| Ohio Hamster 2 | Pos | Neg | Pos | Pos | Pos | NA |
| Ohio hamster 3 | Pos | Neg | ND | Neg | Neg | NA |
| Ohio hamster 4 | Neg | Neg | Pos | Pos | Pos | NA |
| Ohio hamster 5 | Neg | Neg | Neg | ND | Pos | NA |
*LCMV, lymphocytic choriomeningitis virus; IFA, immunofluorescent antibody assay; IHC, immunohistochemistry; RT-PCR, reverse transcription–PCR; ND, no data; Neg, negative; Pos, positive; NA, no amplification (could not get traditional PCR primers to amplify, for sequencing). †The table includes only those rodents that tested positive with ≥1 test.
FigureLymphocytic choriomeningitis (LCM) virus phylogenetic analysis of L- and S-segment sequence differences. A) Maximum likelihood analysis of a 232-nt fragment of the L segment was completed, and bootstrap numbers were generated based on analysis of 500 replicates. The graphic representation was outgrouped to the California (CA) LCM virus sequence. GenBank nos. for the included sequence are as follows: Rhode Island (RI) and Ohio (OH) transplant recipients strain 200501927 (DQ182703), Rhode Island pet store and Ohio distributor rodents strain 200504261 (DQ888889), New York (NY) strain WE (AF004519), Wisconsin (WI) transplant recipients strain 810362 (DQ182706), Missouri (MO) strain Armstrong (J04331), and the CA congenital infection strain 810366 (DQ182707). B) Maximum likelihood analysis of a 611-nt fragment of the S segment NP gene was completed as mentioned above. The GenBank nos. are as follows: RI and OH transplant recipients strain 200501927 (DQ888890), RI pet store guinea pig strain 200502048 (DQ888891),OH distributor hamster strain 200504261 (DQ888893),RI pet store hamsters strain 200501966 (DQ888892), NY strain WE (M22138), WI transplant recipient strain 810362 (DQ182704), MO strain Armstrong (NC_004294), and the CA congenital infection strain 810366 (DQ182705).
Comparison of nucleotide identity differences among LCMV strains and isolates*
| State/sample | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Rhode Island | |||||||||||||
| Lung recipient 1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.4 | 0.4 | 0.4 | 0.4 | 13.4 | 15.8 | 18.1 | 22.9 | |
| Liver recipient 2 | 0.0 | 0.0 | 0.0 | 0.0 | 0.4 | 0.4 | 0.4 | 0.4 | 13.4 | 15.8 | 18.1 | 22.9 | |
| Kidney recipient A 3 | 0.0 | 0.0 | 0.0 | 0.0 | 0.4 | 0.4 | 0.4 | 0.4 | 13.4 | 15.8 | 18.1 | 22.9 | |
| Kidney recipient B 4 | 0.0 | 0.0 | 0.0 | 0.0 | 0.4 | 0.4 | 0.4 | 0.4 | 13.4 | 15.8 | 18.1 | 22.9 | |
| Donor's hamster 5 | 0.0 | 0.0 | 0.0 | 0.0 | 0.4 | 0.4 | 0.4 | 0.4 | 13.4 | 15.8 | 18.1 | 22.9 | |
| Pet store hamster 1 6 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.0 | 0.0 | 0.0 | 12.9 | 15.3 | 18.5 | 23.4 | |
| Pet store hamster 2 7 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.0 | 0.0 | 0.0 | 12.9 | 15.3 | 18.5 | 23.4 | |
| Pet store guinea pig 8 | 0.2 | 0.2 | 0.2 | 0.2 | 0.2 | 0.2 | 0.2 | 0.0 | 12.9 | 15.3 | 18.5 | 23.4 | |
| Ohio | |||||||||||||
| Distributor hamster 9 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.2 | 12.9 | 15.3 | 18.5 | 23.4 | |
| New York | |||||||||||||
| WE 10 | 12.4 | 12.4 | 12.4 | 12.4 | 12.4 | 12.1 | 12.1 | 12.3 | 12.3 | 16.2 | 18.5 | 24.1 | |
| Wisconsin | |||||||||||||
| Kidney recipients 11 | 14.4 | 14.4 | 14.4 | 14.4 | 14.4 | 14.4 | 14.4 | 14.2 | 14.4 | 14.6 | 19.5 | 22.5 | |
| Missouri | |||||||||||||
| Armstrong 12 | 14.1 | 14.1 | 14.1 | 14.1 | 14.1 | 13.7 | 13.7 | 13.9 | 14.1 | 15.2 | 13.7 | 21.7 | |
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| Congenital infection 13 | 14.7 | 14.7 | 14.7 | 14.7 | 14.7 | 14.4 | 14.4 | 14.6 | 14.7 | 13.3 | 14.6 | 14.4 |
*LCMV, lymphocytic choriomeningitis virus. The percentage of differences for each pair of sequences was calculated with PAUP as uncorrected distances. Values on the upper diagonal represent differences in the L fragment (232 nt) and values on the lower diagonal represent differences on the S fragment (611 nt)