Literature DB >> 17551052

Flammeovirga kamogawensis sp. nov., isolated from coastal seawater in Japan.

Shoichi Hosoya1, Akira Yokota1.   

Abstract

Two strains of gliding, agarolytic bacteria, strains YS10(T) and YML5, were isolated from coastal seawater off Kamogawa, Japan. Phylogenetic analysis based on 16S rRNA gene sequences showed that the novel isolates represent a separate lineage within the genus Flammeovirga. DNA-DNA hybridization values between these isolates and the type strains of species of the genus Flammeovirga were significantly lower than those accepted as threshold values for the phylogenetic definition of a species. Furthermore, some of the phenotypic characteristics indicate that the isolates differ from other Flammeovirga species. Based on these differences, it is suggested that the isolates represent a novel species, for which the name Flammeovirga kamogawensis sp. nov. is proposed. The type strain is YS10(T) (=IAM 15451(T)=NCIMB 14281(T)).

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Year:  2007        PMID: 17551052     DOI: 10.1099/ijs.0.64977-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  7 in total

1.  Novel Alginate Lyase (Aly5) from a Polysaccharide-Degrading Marine Bacterium, Flammeovirga sp. Strain MY04: Effects of Module Truncation on Biochemical Characteristics, Alginate Degradation Patterns, and Oligosaccharide-Yielding Properties.

Authors:  Wenjun Han; Jingyan Gu; Yuanyuan Cheng; Huihui Liu; Yuezhong Li; Fuchuan Li
Journal:  Appl Environ Microbiol       Date:  2015-10-30       Impact factor: 4.792

2.  An extra peptide within the catalytic module of a β-agarase affects the agarose degradation pattern.

Authors:  Wen-Jun Han; Jing-Yan Gu; Hui-Hui Liu; Fu-Chuan Li; Zhi-Hong Wu; Yue-Zhong Li
Journal:  J Biol Chem       Date:  2013-02-01       Impact factor: 5.157

3.  Biochemical Characteristics and Substrate Degradation Pattern of a Novel Exo-Type β-Agarase from the Polysaccharide-Degrading Marine Bacterium Flammeovirga sp. Strain MY04.

Authors:  Wenjun Han; Yuanyuan Cheng; Dandan Wang; Shumin Wang; Huihui Liu; Jingyan Gu; Zhihong Wu; Fuchuan Li
Journal:  Appl Environ Microbiol       Date:  2016-07-29       Impact factor: 4.792

4.  Genome sequence of a high agarase-producing strain Flammeovirga sp. SJP92.

Authors:  Qi Dong; Lingwei Ruan; Hong Shi
Journal:  Stand Genomic Sci       Date:  2017-01-26

5.  Biochemical Characteristics and Variable Alginate-Degrading Modes of a Novel Bifunctional Endolytic Alginate Lyase.

Authors:  Yuanyuan Cheng; Dandan Wang; Jingyan Gu; Junge Li; Huihui Liu; Fuchuan Li; Wenjun Han
Journal:  Appl Environ Microbiol       Date:  2017-11-16       Impact factor: 4.792

6.  Genome Sequencing Reveals the Complex Polysaccharide-Degrading Ability of Novel Deep-Sea Bacterium Flammeovirga pacifica WPAGA1.

Authors:  Boliang Gao; Min Jin; Li Li; Wu Qu; Runying Zeng
Journal:  Front Microbiol       Date:  2017-04-10       Impact factor: 5.640

7.  A Novel Bifunctional Endolytic Alginate Lyase with Variable Alginate-Degrading Modes and Versatile Monosaccharide-Producing Properties.

Authors:  Chune Peng; Qingbin Wang; Danrong Lu; Wenjun Han; Fuchuan Li
Journal:  Front Microbiol       Date:  2018-02-08       Impact factor: 5.640

  7 in total

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