Literature DB >> 17548880

Teaching human genetics with mustard: rapid cycling Brassica rapa (fast plants type) as a model for human genetics in the classroom laboratory.

Douglas L Wendell1, Dawn Pickard.   

Abstract

We have developed experiments and materials to model human genetics using rapid cycling Brassica rapa, also known as Fast Plants. Because of their self-incompatibility for pollination and the genetic diversity within strains, B. rapa can serve as a relevant model for human genetics in teaching laboratory experiments. The experiment presented here is a paternity exclusion project in which a child is born with a known mother but two possible alleged fathers. Students use DNA markers (microsatellites) to perform paternity exclusion on these subjects. Realistic DNA marker analysis can be challenging to implement within the limitations of an instructional lab, but we have optimized the experimental methods to work in a teaching lab environment and to maximize the "hands-on" experience for the students. The genetic individuality of each B. rapa plant, revealed by analysis of polymorphic microsatellite markers, means that each time students perform this project, they obtain unique results that foster independent thinking in the process of data interpretation.

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Year:  2007        PMID: 17548880      PMCID: PMC1885900          DOI: 10.1187/cbe.07-02-0010

Source DB:  PubMed          Journal:  CBE Life Sci Educ        ISSN: 1931-7913            Impact factor:   3.325


  9 in total

1.  Origin of spurious multiple bands in the amplification of microsatellite sequences.

Authors:  D Bovo; M Rugge; Y H Shiao
Journal:  Mol Pathol       Date:  1999-02

2.  A simple and rapid method for the preparation of plant genomic DNA for PCR analysis.

Authors:  K Edwards; C Johnstone; C Thompson
Journal:  Nucleic Acids Res       Date:  1991-03-25       Impact factor: 16.971

3.  Rapid-cycling populations of brassica.

Authors:  P H Williams; C B Hill
Journal:  Science       Date:  1986-06-13       Impact factor: 47.728

4.  Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction.

Authors:  J L Weber; P E May
Journal:  Am J Hum Genet       Date:  1989-03       Impact factor: 11.025

5.  Comparison of fluorescence-based semi-automated genotyping of multiple microsatellite loci with autoradiographic techniques.

Authors:  D A Schwengel; A E Jedlicka; E J Nanthakumar; J L Weber; R C Levitt
Journal:  Genomics       Date:  1994-07-01       Impact factor: 5.736

6.  A hypervariable microsatellite revealed by in vitro amplification of a dinucleotide repeat within the cardiac muscle actin gene.

Authors:  M Litt; J A Luty
Journal:  Am J Hum Genet       Date:  1989-03       Impact factor: 11.025

7.  Inclusion of polyvinylpyrrolidone in the polymerase chain reaction reverses the inhibitory effects of polyphenolic contamination of RNA.

Authors:  P K Koonjul; W F Brandt; J M Farrant; G G Lindsey
Journal:  Nucleic Acids Res       Date:  1999-02-01       Impact factor: 16.971

8.  Barley microsatellites: allele variation and mapping.

Authors:  J Becker; M Heun
Journal:  Plant Mol Biol       Date:  1995-02       Impact factor: 4.076

9.  Efficient large-scale development of microsatellites for marker and mapping applications in Brassica crop species.

Authors:  A J Lowe; C Moule; M Trick; K J Edwards
Journal:  Theor Appl Genet       Date:  2003-12-05       Impact factor: 5.699

  9 in total
  2 in total

1.  Using Saccharomyces cerevisiae to test the mutagenicity of household compounds: an open ended hypothesis-driven teaching lab.

Authors:  Pamela A Marshall
Journal:  CBE Life Sci Educ       Date:  2007       Impact factor: 3.325

2.  DNA-Based Genetic Markers for Rapid Cycling Brassica Rapa (Fast Plants Type) Designed for the Teaching Laboratory.

Authors:  Eryn E Slankster; Jillian M Chase; Lauren A Jones; Douglas L Wendell
Journal:  Front Plant Sci       Date:  2012-06-01       Impact factor: 5.753

  2 in total

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