Literature DB >> 17547211

Classification of heavy-metal toxicity by human DNA microarray analysis.

Koji Kawata1, Hiroyuki Yokoo, Ryuhei Shimazaki, Satoshi Okabe.   

Abstract

Microarray technology is proving to be a useful tool to classify undefined environmental toxicants, to investigate underlying mechanisms of toxicity, and to identify candidate toxicant-specific genetic markers by examining global effects of putative toxicants on gene expression profiles. The aim of this study was to evaluate the toxicities of six heavy metals through the comparison with gene expression patterns induced by well-known chemicals. For this purpose, we first identified the genes altered specifically in HepG2 under the exposure of 2,3-dimethoxy-1,4-naphthoquinone (DMNQ), phenol, and N-nitrosodimethylamine (DMN), which were selected as the model chemicals, using DNA microarray. On the basis of the expression profiles of these genes, toxicities of six heavy metals, arsenic, cadmium, nickel, antimony, mercury, and chromium, were evaluated. The specific gene alteration and hierarchical clustering revealed that biological action of six heavy metals was clearly related to that of DMNQ which has been reported to be a reactive oxygen species (ROS) generating chemical and which induced the genes associated with cell proliferative responses. These results suggest that cell proliferative responses which are probably caused by ROS are a major apparent biological action of high-dose heavy metals, supporting the previous reports. Overall, a mechanism-based classification by DNA microarray would be an efficient method for evaluation of toxicities of environmental samples.

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Year:  2007        PMID: 17547211     DOI: 10.1021/es062717d

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  21 in total

1.  Gene expression and pathway analysis of human hepatocellular carcinoma cells treated with cadmium.

Authors:  Laura Cartularo; Freda Laulicht; Hong Sun; Thomas Kluz; Jonathan H Freedman; Max Costa
Journal:  Toxicol Appl Pharmacol       Date:  2015-08-24       Impact factor: 4.219

2.  Heavy metal contamination in soil alongside mountain railway in Sichuan, China.

Authors:  Hao Liu; Li-Ping Chen; Ying-Wei Ai; Xia Yang; Yan-Hua Yu; Yuan-Bin Zuo; Guo-Yong Fu
Journal:  Environ Monit Assess       Date:  2008-06-14       Impact factor: 2.513

3.  In vitro transcriptomic prediction of hepatotoxicity for early drug discovery.

Authors:  Feng Cheng; Dan Theodorescu; Ira G Schulman; Jae K Lee
Journal:  J Theor Biol       Date:  2011-08-27       Impact factor: 2.691

Review 4.  PML nuclear bodies: assembly and oxidative stress-sensitive sumoylation.

Authors:  Umut Sahin; Hugues de Thé; Valérie Lallemand-Breitenbach
Journal:  Nucleus       Date:  2014       Impact factor: 4.197

Review 5.  Oxygenomics in environmental stress.

Authors:  H Sone; H Akanuma; T Fukuda
Journal:  Redox Rep       Date:  2010       Impact factor: 4.412

6.  DUOX expression in human keratinocytes and bronchial epithelial cells: Influence of vanadate.

Authors:  Thomas Hill; Robert H Rice
Journal:  Toxicol In Vitro       Date:  2017-10-12       Impact factor: 3.500

Review 7.  Acute promyelocytic leukaemia: novel insights into the mechanisms of cure.

Authors:  Hugues de Thé; Zhu Chen
Journal:  Nat Rev Cancer       Date:  2010-10-22       Impact factor: 60.716

8.  Arsenic exposure, telomere length, and expression of telomere-related genes among Bangladeshi individuals.

Authors:  Jianjun Gao; Shantanu Roy; Lin Tong; Maria Argos; Farzana Jasmine; Ronald Rahaman; Muhammad Rakibuz-Zaman; Faruque Parvez; Alauddin Ahmed; Samar K Hore; Golam Sarwar; Vesna Slavkovich; Mohammad Yunus; Mahfuzar Rahman; John A Baron; Joseph H Graziano; Habibul Ahsan; Brandon L Pierce
Journal:  Environ Res       Date:  2014-11-25       Impact factor: 6.498

9.  Methylmercury exposure increases lipocalin related (lpr) and decreases activated in blocked unfolded protein response (abu) genes and specific miRNAs in Caenorhabditis elegans.

Authors:  Martina Rudgalvyte; Natalia VanDuyn; Vuokko Aarnio; Liisa Heikkinen; Juhani Peltonen; Merja Lakso; Richard Nass; Garry Wong
Journal:  Toxicol Lett       Date:  2013-07-18       Impact factor: 4.372

10.  Regulation of the tumor suppressor PML by sequential post-translational modifications.

Authors:  M Lienhard Schmitz; Inna Grishina
Journal:  Front Oncol       Date:  2012-12-31       Impact factor: 6.244

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