Literature DB >> 17545971

Peptide arrays on cellulose support: SPOT synthesis, a time and cost efficient method for synthesis of large numbers of peptides in a parallel and addressable fashion.

Kai Hilpert1, Dirk F H Winkler, Robert E W Hancock.   

Abstract

Peptide synthesis on cellulose using SPOT technology allows the parallel synthesis of large numbers of addressable peptides in small amounts. In addition, the cost per peptide is less than 1% of peptides synthesized conventionally on resin. The SPOT method follows standard fluorenyl-methoxy-carbonyl chemistry on conventional cellulose sheets, and can utilize more than 600 different building blocks. The procedure involves three phases: preparation of the cellulose membrane, stepwise coupling of the amino acids and cleavage of the side-chain protection groups. If necessary, peptides can be cleaved from the membrane for assays performed using soluble peptides. These features make this method an excellent tool for screening large numbers of peptides for many different purposes. Potential applications range from simple binding assays, to more sophisticated enzyme assays and studies with living microbes or cells. The time required to complete the protocol depends on the number and length of the peptides. For example, 400 9-mer peptides can be synthesized within 6 days.

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Year:  2007        PMID: 17545971     DOI: 10.1038/nprot.2007.160

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  96 in total

1.  Proteome-wide detection of Abl1 SH3-binding peptides by integrating computational prediction and peptide microarray.

Authors:  Zheng Xu; Tingjun Hou; Nan Li; Yang Xu; Wei Wang
Journal:  Mol Cell Proteomics       Date:  2011-10-24       Impact factor: 5.911

2.  Synthetic peptide arrays for pathway-level protein monitoring by liquid chromatography-tandem mass spectrometry.

Authors:  Johannes A Hewel; Jian Liu; Kento Onishi; Vincent Fong; Shamanta Chandran; Jonathan B Olsen; Oxana Pogoutse; Mike Schutkowski; Holger Wenschuh; Dirk F H Winkler; Larry Eckler; Peter W Zandstra; Andrew Emili
Journal:  Mol Cell Proteomics       Date:  2010-05-13       Impact factor: 5.911

3.  Detailed specificity analysis of antibodies binding to modified histone tails with peptide arrays.

Authors:  Ina Bock; Arunkumar Dhayalan; Srikanth Kudithipudi; Ole Brandt; Philipp Rathert; Albert Jeltsch
Journal:  Epigenetics       Date:  2011-02-01       Impact factor: 4.528

4.  High throughput screening methods for assessing antibiofilm and immunomodulatory activities of synthetic peptides.

Authors:  Evan F Haney; Sarah C Mansour; Ashley L Hilchie; César de la Fuente-Núñez; Robert E W Hancock
Journal:  Peptides       Date:  2015-03-31       Impact factor: 3.750

5.  Analysis of the substrate specificity of the Dim-5 histone lysine methyltransferase using peptide arrays.

Authors:  Philipp Rathert; Xing Zhang; Christian Freund; Xiaodong Cheng; Albert Jeltsch
Journal:  Chem Biol       Date:  2008-01

6.  Protein identification false discovery rates for very large proteomics data sets generated by tandem mass spectrometry.

Authors:  Lukas Reiter; Manfred Claassen; Sabine P Schrimpf; Marko Jovanovic; Alexander Schmidt; Joachim M Buhmann; Michael O Hengartner; Ruedi Aebersold
Journal:  Mol Cell Proteomics       Date:  2009-07-16       Impact factor: 5.911

7.  Interactions and oligomerization of hantavirus glycoproteins.

Authors:  Jussi Hepojoki; Tomas Strandin; Antti Vaheri; Hilkka Lankinen
Journal:  J Virol       Date:  2010-01       Impact factor: 5.103

8.  Discovery of Next-Generation Antimicrobials through Bacterial Self-Screening of Surface-Displayed Peptide Libraries.

Authors:  Ashley T Tucker; Sean P Leonard; Cory D DuBois; Gregory A Knauf; Ashley L Cunningham; Claus O Wilke; M Stephen Trent; Bryan W Davies
Journal:  Cell       Date:  2018-01-04       Impact factor: 41.582

9.  Peptide arrays for development of PDGFRβ Affine molecules.

Authors:  Annabell Marr; Felix Nissen; Daniel Maisch; Annette Altmann; Shoaib Rana; Jürgen Debus; Peter E Huber; Uwe Haberkorn; Vasileios Askoxylakis
Journal:  Mol Imaging Biol       Date:  2013-08       Impact factor: 3.488

10.  Specificity analysis of protein lysine methyltransferases using SPOT peptide arrays.

Authors:  Srikanth Kudithipudi; Denis Kusevic; Sara Weirich; Albert Jeltsch
Journal:  J Vis Exp       Date:  2014-11-29       Impact factor: 1.355

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