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Literature DB >> 17545183

OBO-Edit--an ontology editor for biologists.

John Day-Richter¹, Midori A Harris, Melissa Haendel, Suzanna Lewis.

Abstract

UNLABELLED: OBO-Edit is an open source, platform-independent ontology editor developed and maintained by the Gene Ontology Consortium. Implemented in Java, OBO-Edit uses a graph-oriented approach to display and edit ontologies. OBO-Edit is particularly valuable for viewing and editing biomedical ontologies. AVAILABILITY: https://sourceforge.net/project/showfiles.php?group_id=36855.

Mesh：

Substances：
Proteins

Year: 2007 PMID： 17545183 DOI： 10.1093/bioinformatics/btm112

Source DB: PubMed Journal: Bioinformatics ISSN： 1367-4803 Impact factor: 6.937

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Cited

133 in total

1. The National Center for Biomedical Ontology.

Authors: Mark A Musen; Natalya F Noy; Nigam H Shah; Patricia L Whetzel; Christopher G Chute; Margaret-Anne Story; Barry Smith
Journal: J Am Med Inform Assoc Date: 2011-11-10 Impact factor: 4.497

2. GMO Genetic Elements Thesaurus (GMO-GET): a controlled vocabulary for the consensus designation of introduced or modified genetic elements in genetically modified organisms.

Authors: Paulien Adamse; Emilie Dagand; Karen Bohmert-Tatarev; Daniela Wahler; Manoela Miranda; Esther J Kok; Joachim Bendiek
Journal: BMC Bioinformatics Date: 2021-02-05 Impact factor: 3.169

OBO-Edit--an ontology editor for biologists.

1. The National Center for Biomedical Ontology.

2. GMO Genetic Elements Thesaurus (GMO-GET): a controlled vocabulary for the consensus designation of introduced or modified genetic elements in genetically modified organisms.

3. Animal trait ontology: The importance and usefulness of a unified trait vocabulary for animal species.

Review 4. Accessing and integrating data and knowledge for biomedical research.

5. LexGrid: a framework for representing, storing, and querying biomedical terminologies from simple to sublime.

6. The Human Phenotype Ontology: a tool for annotating and analyzing human hereditary disease.

7. Mass spectrometer output file format mzML.

8. Ontology for vector surveillance and management.

Review 9. The mammalian phenotype ontology: enabling robust annotation and comparative analysis.

10. The Units Ontology: a tool for integrating units of measurement in science.