Literature DB >> 17543484

Evaluation of haplotype discrimination capacity of 35 Y-chromosomal short tandem repeat loci.

Heike Rodig1, Lutz Roewer, Annett Gross, Tom Richter, Peter de Knijff, Manfred Kayser, Werner Brabetz.   

Abstract

The haplotype discrimination capacity of the 9 Y-chromosomal short tandem repeat (Y-STR) loci comprising the so called minimal haplotype together with additional 26 recently described single-copy Y-STRs was evaluated within 391 males from Germany, The Netherlands, and Turkey. The aim of this study was to identify the minimum number of Y-STRs needed in addition to the recommended 9 minimal haplotype loci or the 11 SWGDAM loci for individualizing male lineages. Highest gene diversities were shown for DYS385 loci, DYS449, DYS481, DYS570, DYS447, DYS576, DYS389-II, and DYS390 (D=0.7518-0.8746). The five Y-STRs DYS447, DYS449, DYS481, DYS570, and DYS576 comprised the smallest set of loci in addition to the previously recommended standard Y-STRs leading to the individualization of all males from each single population group. Complete resolution of the pooled population was achieved by the additional genotyping of two further loci, DYS446 or DYS505 and DYF406S1 or DYS522.

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Year:  2007        PMID: 17543484     DOI: 10.1016/j.forsciint.2007.04.223

Source DB:  PubMed          Journal:  Forensic Sci Int        ISSN: 0379-0738            Impact factor:   2.395


  9 in total

Review 1.  Y chromosome STR typing in crime casework.

Authors:  Lutz Roewer
Journal:  Forensic Sci Med Pathol       Date:  2009-05-20       Impact factor: 2.007

2.  The validation study of a novel assay with 30 slow and moderate mutation Y-STR markers for criminal investigation and database applications.

Authors:  Yongsong Zhou; Tong Xie; Yuxin Guo; Xinglin Mei; Qiong Lan; Yating Fang; Xiaoye Jin; Bofeng Zhu
Journal:  Int J Legal Med       Date:  2019-03-26       Impact factor: 2.686

3.  Evaluation of 14 Y-chromosomal short tandem repeat haplotype with focus on DYS449, DYS456, and DYS458: Czech population sample.

Authors:  Edvard Ehler; Richard Marvan; Daniel Vanek
Journal:  Croat Med J       Date:  2010-02       Impact factor: 1.351

4.  Improving global and regional resolution of male lineage differentiation by simple single-copy Y-chromosomal short tandem repeat polymorphisms.

Authors:  Mark Vermeulen; Andreas Wollstein; Kristiaan van der Gaag; Oscar Lao; Yali Xue; Qiuju Wang; Lutz Roewer; Hans Knoblauch; Chris Tyler-Smith; Peter de Knijff; Manfred Kayser
Journal:  Forensic Sci Int Genet       Date:  2009-02-23       Impact factor: 4.882

5.  Improved Y-STR typing for disaster victim identification, missing persons investigations, and historical human skeletal remains.

Authors:  Angie Ambers; Jitka Votrubova; Daniel Vanek; Antti Sajantila; Bruce Budowle
Journal:  Int J Legal Med       Date:  2018-02-23       Impact factor: 2.686

Review 6.  Forensic use of Y-chromosome DNA: a general overview.

Authors:  Manfred Kayser
Journal:  Hum Genet       Date:  2017-03-17       Impact factor: 4.132

7.  Distinct genetic variation and heterogeneity of the Iranian population.

Authors:  Zohreh Mehrjoo; Zohreh Fattahi; Maryam Beheshtian; Marzieh Mohseni; Hossein Poustchi; Fariba Ardalani; Khadijeh Jalalvand; Sanaz Arzhangi; Zahra Mohammadi; Shahrouz Khoshbakht; Farid Najafi; Pooneh Nikuei; Mohammad Haddadi; Elham Zohrehvand; Morteza Oladnabi; Akbar Mohammadzadeh; Mandana Hadi Jafari; Tara Akhtarkhavari; Ehsan Shamsi Gooshki; Aliakbar Haghdoost; Reza Najafipour; Lisa-Marie Niestroj; Barbara Helwing; Yasmina Gossmann; Mohammad Reza Toliat; Reza Malekzadeh; Peter Nürnberg; Kimia Kahrizi; Hossein Najmabadi; Michael Nothnagel
Journal:  PLoS Genet       Date:  2019-09-24       Impact factor: 5.917

8.  Comprehensive genetic structure analysis of Han population from Dalian City revealed by 20 Y-STRs.

Authors:  Atif Adnan; Kaidirina Kasimu; Allah Rakha; Guanglin He; Tongya Yang; Chuan-Chao Wang; Jie Lu; Jin-Feng Xuan
Journal:  Mol Genet Genomic Med       Date:  2020-01-27       Impact factor: 2.183

9.  Continent-wide decoupling of Y-chromosomal genetic variation from language and geography in native South Americans.

Authors:  Lutz Roewer; Michael Nothnagel; Leonor Gusmão; Veronica Gomes; Miguel González; Daniel Corach; Andrea Sala; Evguenia Alechine; Teresinha Palha; Ney Santos; Andrea Ribeiro-Dos-Santos; Maria Geppert; Sascha Willuweit; Marion Nagy; Sarah Zweynert; Miriam Baeta; Carolina Núñez; Begoña Martínez-Jarreta; Fabricio González-Andrade; Elizeu Fagundes de Carvalho; Dayse Aparecida da Silva; Juan José Builes; Daniel Turbón; Ana Maria Lopez Parra; Eduardo Arroyo-Pardo; Ulises Toscanini; Lisbeth Borjas; Claudia Barletta; Elizabeth Ewart; Sidney Santos; Michael Krawczak
Journal:  PLoS Genet       Date:  2013-04-11       Impact factor: 5.917

  9 in total

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