Literature DB >> 17542632

Polymorphic phase behavior of cardiolipin derivatives studied by coarse-grained molecular dynamics.

Martin Dahlberg1.   

Abstract

Cardiolipin (CL) is a negatively charged four acyl chain lipid, associated with energy production in bacterial and mitochondrial membranes. Due to the shape of CL, negative curvatures of aggregates are favorable if the charges in the head group can be reduced. The phase polymorphism of CL, and of associated derivatives with 2, 3, 4, or 5 chains, has been determined previously and offers a model system in which micellar, lamellar, and inverse hexagonal phases can be observed. We present an extension to a previously established coarse-grained molecular dynamics model with the aim of reproducing the different CL phases with two adjustable parameters: the number of acyl chains and the effective head group charge. With molecular dynamics simulations of large lipid systems, we observed transitions between different phases on the nanosecond to microsecond time scale. Charge screening by high salt or low pH was successfully modeled by a reduction of phosphate charge, which led to the adoption of aggregates with more negative curvature. Although specific ion binding at the interface and other atomistic details are sacrificed in the coarse-grained model, we found that it captures general phase features over a large range of aggregate geometries.

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Year:  2007        PMID: 17542632     DOI: 10.1021/jp071954f

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  23 in total

1.  Dynamic simulation of cardiolipin remodeling: greasing the wheels for an interpretative approach to lipidomics.

Authors:  Michael A Kiebish; Rob Bell; Kui Yang; Toan Phan; Zhongdan Zhao; William Ames; Thomas N Seyfried; Richard W Gross; Jeffrey H Chuang; Xianlin Han
Journal:  J Lipid Res       Date:  2010-04-21       Impact factor: 5.922

Review 2.  Cardiolipin synthesis for the assembly of bacterial and mitochondrial membranes.

Authors:  Michael Schlame
Journal:  J Lipid Res       Date:  2007-12-12       Impact factor: 5.922

3.  Buckling Under Pressure: Curvature-Based Lipid Segregation and Stability Modulation in Cardiolipin-Containing Bilayers.

Authors:  Kevin J Boyd; Nathan N Alder; Eric R May
Journal:  Langmuir       Date:  2017-06-28       Impact factor: 3.882

4.  Molecular Dynamics Analysis of Cardiolipin and Monolysocardiolipin on Bilayer Properties.

Authors:  Kevin J Boyd; Nathan N Alder; Eric R May
Journal:  Biophys J       Date:  2018-05-08       Impact factor: 4.033

5.  Dysfunctional cardiac mitochondrial bioenergetic, lipidomic, and signaling in a murine model of Barth syndrome.

Authors:  Michael A Kiebish; Kui Yang; Xinping Liu; David J Mancuso; Shaoping Guan; Zhongdan Zhao; Harold F Sims; Rebekah Cerqua; W Todd Cade; Xianlin Han; Richard W Gross
Journal:  J Lipid Res       Date:  2013-02-14       Impact factor: 5.922

6.  The ionization properties of cardiolipin and its variants in model bilayers.

Authors:  Murugappan Sathappa; Nathan N Alder
Journal:  Biochim Biophys Acta       Date:  2016-03-07

7.  Endophilin B1/Bif-1 stimulates BAX activation independently from its capacity to produce large scale membrane morphological rearrangements.

Authors:  Aitor Etxebarria; Oihana Terrones; Hirohito Yamaguchi; Ane Landajuela; Olatz Landeta; Bruno Antonsson; Hong-Gang Wang; Gorka Basañez
Journal:  J Biol Chem       Date:  2008-12-11       Impact factor: 5.157

8.  Genetic ablation of calcium-independent phospholipase A2gamma leads to alterations in mitochondrial lipid metabolism and function resulting in a deficient mitochondrial bioenergetic phenotype.

Authors:  David J Mancuso; Harold F Sims; Xianlin Han; Christopher M Jenkins; Shao Ping Guan; Kui Yang; Sung Ho Moon; Terri Pietka; Nada A Abumrad; Paul H Schlesinger; Richard W Gross
Journal:  J Biol Chem       Date:  2007-10-08       Impact factor: 5.157

9.  Specific cardiolipin-SecY interactions are required for proton-motive force stimulation of protein secretion.

Authors:  Robin A Corey; Euan Pyle; William J Allen; Daniel W Watkins; Marina Casiraghi; Bruno Miroux; Ignacio Arechaga; Argyris Politis; Ian Collinson
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-16       Impact factor: 11.205

10.  X-ray structure, thermodynamics, elastic properties and MD simulations of cardiolipin/dimyristoylphosphatidylcholine mixed membranes.

Authors:  Alexander L Boscia; Bradley W Treece; Dariush Mohammadyani; Judith Klein-Seetharaman; Anthony R Braun; Tsjerk A Wassenaar; Beate Klösgen; Stephanie Tristram-Nagle
Journal:  Chem Phys Lipids       Date:  2013-12-28       Impact factor: 3.329

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