Literature DB >> 17541732

The polymorphism of indomethacin: an analysis by density functional theory calculations.

Clare Aubrey-Medendorp1, Matthew J Swadley, Tonglei Li.   

Abstract

PURPOSE: Indomethacin exhibits conformational polymorphism. Crystal structures of two polymorphs have been solved bearing different molecular conformations. Herein, the conformational variance in the crystals was examined by density functional theory (DFT) calculations in order to understand the mutual influence between electronic structures and crystal packing.
METHODS: Electronic structures of the two polymorphs and the single molecule of indomethacin were calculated with quantum mechanical methods. Electronic properties based upon conceptual density functional theory were thereby analyzed. A potential energy surface was generated with regard to the conformational flexibility, which was identified by the electronic analysis. Lattice energies of the two polymorphs were further calculated with an empirically augmented DFT method.
RESULTS: Electronic properties, including electronic and nuclear Fukui functions, provided a fundamental understanding of the energetic competition in the indomethacin molecule between delocalization of p-orbitals of two aromatic rings and steric repulsions. Two dihedral angles (the tau1 and tau2 in Fig. 1) were found playing a crucial role in affecting such competition and determining the variation of molecular conformations. The existing polymorphs, alpha- and gamma-forms, were located in local minima on the energy surface based on the two dihedral angles of their molecular conformations. Calculated lattice energies suggest the alpha-form is more stable than the gamma-form at the zero K.
CONCLUSIONS: The polymorphism of indomethacin lies in various meta-stable conformations of the molecule that are results of different orientations between the two aromatic indole and phenyl rings. The analysis of electronic and nuclear Fukui functions permits the revelation of local energy barriers that determine the conformational diversity and, for the case of indomethacin, the conformational polymorphism.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17541732     DOI: 10.1007/s11095-007-9346-9

Source DB:  PubMed          Journal:  Pharm Res        ISSN: 0724-8741            Impact factor:   4.200


  18 in total

1.  Conceptual Density-Functional Theory for General Chemical Reactions, Including Those That Are Neither Charge- nor Frontier-Orbital-Controlled. 2. Application to Molecules Where Frontier Molecular Orbital Theory Fails.

Authors:  James S M Anderson; Junia Melin; Paul W Ayers
Journal:  J Chem Theory Comput       Date:  2007-03       Impact factor: 6.006

2.  Conceptual Density-Functional Theory for General Chemical Reactions, Including Those That Are Neither Charge- nor Frontier-Orbital-Controlled. 1. Theory and Derivation of a General-Purpose Reactivity Indicator.

Authors:  James S M Anderson; Junia Melin; Paul W Ayers
Journal:  J Chem Theory Comput       Date:  2007-03       Impact factor: 6.006

3.  A third blind test of crystal structure prediction.

Authors:  G M Day; W D S Motherwell; H L Ammon; S X M Boerrigter; R G Della Valle; E Venuti; A Dzyabchenko; J D Dunitz; B Schweizer; B P van Eijck; P Erk; J C Facelli; V E Bazterra; M B Ferraro; D W M Hofmann; F J J Leusen; C Liang; C C Pantelides; P G Karamertzanis; S L Price; T C Lewis; H Nowell; A Torrisi; H A Scheraga; Y A Arnautova; M U Schmidt; P Verwer
Journal:  Acta Crystallogr B       Date:  2005-09-23

4.  Study of crystal packing on the solid-state reactivity of indomethacin with density functional theory.

Authors:  Tonglei Li; Shaoxin Feng
Journal:  Pharm Res       Date:  2005-08-16       Impact factor: 4.200

5.  The physical basis of the hard/soft acid/base principle.

Authors:  Paul W Ayers
Journal:  Faraday Discuss       Date:  2007       Impact factor: 4.008

6.  Elucidating the hard/soft acid/base principle: a perspective based on half-reactions.

Authors:  Paul W Ayers; Robert G Parr; Ralph G Pearson
Journal:  J Chem Phys       Date:  2006-05-21       Impact factor: 3.488

7.  Acids and bases.

Authors:  R G Pearson
Journal:  Science       Date:  1966-01-14       Impact factor: 47.728

8.  Empirically augmented density functional theory for predicting lattice energies of aspirin, acetaminophen polymorphs, and ibuprofen homochiral and racemic crystals.

Authors:  Tonglei Li; Shaoxin Feng
Journal:  Pharm Res       Date:  2006-08-23       Impact factor: 4.200

9.  Hardness, softness, and the fukui function in the electronic theory of metals and catalysis.

Authors:  W Yang; R G Parr
Journal:  Proc Natl Acad Sci U S A       Date:  1985-10       Impact factor: 11.205

10.  Crystal and molecular structure of an antiinflammatory agent, indomethacin, 1-(p-chlorobenzoyl)-5-methoxy-2-methylindole-3-acetic acid.

Authors:  T J Kistenmacher; R E Marsh
Journal:  J Am Chem Soc       Date:  1972-02-23       Impact factor: 15.419

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.