Literature DB >> 17533454

Novel tRNA aminoacylation mechanisms.

Terry Cathopoulis1, Pitak Chuawong, Tamara L Hendrickson.   

Abstract

In nature, ribosomally synthesized proteins can contain at least 22 different amino acids: the 20 common amino acids as well as selenocysteine and pyrrolysine. Each of these amino acids is inserted into proteins codon-specifically via an aminoacyl-transfer RNA (aa-tRNA). In most cases, these aa-tRNAs are biosynthesized directly by a set of highly specific and accurate aminoacyl-tRNA synthetases (aaRSs). However, in some cases aaRSs with relaxed or novel substrate specificities cooperate with other enzymes to generate specific canonical and non-canonical aminoacyl-tRNAs.

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Year:  2007        PMID： 17533454     DOI： 10.1039/b618899k

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN： 1742-2051


  13 in total

1.  The kinase activity of the Helicobacter pylori Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase is sensitive to distal mutations in its putative ammonia tunnel.

Authors:  Liangjun Zhao; Sajeewa W Dewage; Michael J Bell; Keng-Ming Chang; Shirin Fatma; Nilesh Joshi; Gayathri Silva; G Andrés Cisneros; Tamara L Hendrickson
Journal:  Biochemistry       Date:  2011-12-29       Impact factor: 3.162

2.  Structure of the Pseudomonas aeruginosa transamidosome reveals unique aspects of bacterial tRNA-dependent asparagine biosynthesis.

Authors:  Tateki Suzuki; Akiyoshi Nakamura; Koji Kato; Dieter Söll; Isao Tanaka; Kelly Sheppard; Min Yao
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-29       Impact factor: 11.205

3.  Crystal structure of the N-terminal anticodon-binding domain of the nondiscriminating aspartyl-tRNA synthetase from Helicobacter pylori.

Authors:  Chomphunuch Songsiriritthigul; Suwimon Suebka; Chun Jung Chen; Pitchayada Fuengfuloy; Pitak Chuawong
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2017-01-19       Impact factor: 1.056

4.  Computational analysis of ammonia transfer along two intramolecular tunnels in Staphylococcus aureus glutamine-dependent amidotransferase (GatCAB).

Authors:  Sajeewa Walimuni Dewage; G Andrés Cisneros
Journal:  J Phys Chem B       Date:  2015-02-20       Impact factor: 2.991

5.  A tRNA-independent mechanism for transamidosome assembly promotes aminoacyl-tRNA transamidation.

Authors:  Gayathri N Silva; Shirin Fatma; Ashley M Floyd; Frederic Fischer; Pitak Chuawong; Amanda N Cruz; Rachel M Simari; Nilesh Joshi; Daniel Kern; Tamara L Hendrickson
Journal:  J Biol Chem       Date:  2012-12-20       Impact factor: 5.157

6.  Methanothermobacter thermautotrophicus tRNA Gln confines the amidotransferase GatCAB to asparaginyl-tRNA Asn formation.

Authors:  Kelly Sheppard; R Lynn Sherrer; Dieter Söll
Journal:  J Mol Biol       Date:  2008-01-31       Impact factor: 5.469

7.  On the evolution of the tRNA-dependent amidotransferases, GatCAB and GatDE.

Authors:  Kelly Sheppard; Dieter Söll
Journal:  J Mol Biol       Date:  2008-01-16       Impact factor: 5.469

Review 8.  Amino acid modifications on tRNA.

Authors:  Jing Yuan; Kelly Sheppard; Dieter Söll
Journal:  Acta Biochim Biophys Sin (Shanghai)       Date:  2008-07       Impact factor: 3.848

9.  Recognition of tRNAGln by Helicobacter pylori GluRS2--a tRNAGln-specific glutamyl-tRNA synthetase.

Authors:  Keng-Ming Chang; Tamara L Hendrickson
Journal:  Nucleic Acids Res       Date:  2009-09-15       Impact factor: 16.971

Review 10.  From one amino acid to another: tRNA-dependent amino acid biosynthesis.

Authors:  Kelly Sheppard; Jing Yuan; Michael J Hohn; Brian Jester; Kevin M Devine; Dieter Söll
Journal:  Nucleic Acids Res       Date:  2008-02-05       Impact factor: 16.971
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