Literature DB >> 17526576

Elastic properties of viruses.

B Stephanidis1, S Adichtchev, P Gouet, A McPherson, A Mermet.   

Abstract

Viruses are compact biological nanoparticles whose elastic and dynamical properties are hardly known. Inelastic (Brillouin) light scattering was used to characterize these properties, from microcrystals of the Satellite Tobacco Mosaic Virus, a nearly spherical plant virus of 17-nm diameter. Longitudinal sound velocities in wet and dry Satellite Tobacco Mosaic Virus crystals were determined and compared to that of the well-known protein crystal, lysozyme. Localized vibrational modes of the viral particles (i.e., particle modes) were sought in the relevant frequency ranges, as derived assuming the viruses as full free nanospheres. Despite very favorable conditions, regarding virus concentration and expected low damping in dry microcrystals, no firm evidence of virus particle modes could be detected.

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Year:  2007        PMID: 17526576      PMCID: PMC1929047          DOI: 10.1529/biophysj.107.109033

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  25 in total

Review 1.  Imaging of viruses by atomic force microscopy.

Authors:  Yu G Kuznetsov; A J Malkin; R W Lucas; M Plomp; A McPherson
Journal:  J Gen Virol       Date:  2001-09       Impact factor: 3.891

2.  Motion of an antiviral compound in a rhinovirus capsid under rotational symmetry boundary conditions.

Authors:  Shigetaka Yoneda; Teruyo Yoneda; Youji Kurihara; Hideaki Umeyama
Journal:  J Mol Graph Model       Date:  2002-08       Impact factor: 2.518

3.  Estimate of the vibrational frequencies of spherical virus particles.

Authors:  L H Ford
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2003-05-23

4.  Sound velocity and elasticity of tetragonal lysozyme crystals by Brillouin spectroscopy.

Authors:  S Speziale; F Jiang; C L Caylor; S Kriminski; C-S Zha; R E Thorne; T S Duffy
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

5.  Far-infrared and Raman vibrational transitions of a solid sphere: Selection rules.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1992-09-01

6.  Bacteriophage capsids: tough nanoshells with complex elastic properties.

Authors:  I L Ivanovska; P J de Pablo; B Ibarra; G Sgalari; F C MacKintosh; J L Carrascosa; C F Schmidt; G J L Wuite
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-07       Impact factor: 11.205

7.  Comment on "Estimate of the vibrational frequencies of spherical virus particles".

Authors:  Lucien Saviot; Daniel B Murray; Alain Mermet; Eugène Duval
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-02-25

8.  Molecular dynamics simulations of the complete satellite tobacco mosaic virus.

Authors:  Peter L Freddolino; Anton S Arkhipov; Steven B Larson; Alexander McPherson; Klaus Schulten
Journal:  Structure       Date:  2006-03       Impact factor: 5.006

9.  Acoustic phonon quantization and low-frequency Raman spectra of spherical viruses.

Authors:  Mina Talati; Prafulla K Jha
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-01-04

10.  Three-dimensional structure of satellite tobacco mosaic virus at 2.9 A resolution.

Authors:  S B Larson; S Koszelak; J Day; A Greenwood; J A Dodds; A McPherson
Journal:  J Mol Biol       Date:  1993-05-20       Impact factor: 5.469

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  9 in total

1.  Vibrational dynamics of icosahedrally symmetric biomolecular assemblies compared with predictions based on continuum elasticity.

Authors:  Zheng Yang; Ivet Bahar; Michael Widom
Journal:  Biophys J       Date:  2009-06-03       Impact factor: 4.033

2.  Viral capsid equilibrium dynamics reveals nonuniform elastic properties.

Authors:  Eric R May; Ankush Aggarwal; William S Klug; Charles L Brooks
Journal:  Biophys J       Date:  2011-06-08       Impact factor: 4.033

3.  Magnetic virus-like nanoparticles in N. benthamiana plants: a new paradigm for environmental and agronomic biotechnological research.

Authors:  Xinlei Huang; Barry D Stein; Hu Cheng; Andrey Malyutin; Irina B Tsvetkova; David V Baxter; Nicholas B Remmes; Jeanmarie Verchot; Cheng Kao; Lyudmila M Bronstein; Bogdan Dragnea
Journal:  ACS Nano       Date:  2011-04-05       Impact factor: 15.881

4.  Structures of additional crystal forms of Satellite tobacco mosaic virus grown from a variety of salts.

Authors:  Alexander McPherson
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2021-11-29       Impact factor: 1.056

5.  Stimulated Brillouin Scattering Microscopic Imaging.

Authors:  Charles W Ballmann; Jonathan V Thompson; Andrew J Traverso; Zhaokai Meng; Marlan O Scully; Vladislav V Yakovlev
Journal:  Sci Rep       Date:  2015-12-22       Impact factor: 4.379

6.  Targeted antiviral treatment using non-ionizing radiation therapy for SARS-CoV-2 and viral pandemics preparedness: Technique, methods and practical notes for clinical application.

Authors:  Ayan Barbora; Refael Minnes
Journal:  PLoS One       Date:  2021-05-14       Impact factor: 3.240

Review 7.  Onsite detection of plant viruses using isothermal amplification assays.

Authors:  Alangar I Bhat; Rashid Aman; Magdy Mahfouz
Journal:  Plant Biotechnol J       Date:  2022-07-11       Impact factor: 13.263

8.  Resonant Dipolar Coupling of Microwaves with Confined Acoustic Vibrations in a Rod-shaped Virus.

Authors:  Chi-Kuang Sun; Yi-Chun Tsai; Yi-Jan E Chen; Tzu-Ming Liu; Hui-Yuan Chen; Han-Ching Wang; Chu-Fang Lo
Journal:  Sci Rep       Date:  2017-07-04       Impact factor: 4.379

9.  Intrinsic elasticity of nucleosomes is encoded by histone variants and calibrated by their binding partners.

Authors:  Daniël P Melters; Mary Pitman; Tatini Rakshit; Emilios K Dimitriadis; Minh Bui; Garegin A Papoian; Yamini Dalal
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-11       Impact factor: 11.205

  9 in total

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