Literature DB >> 17514412

Modification of axial fiber contact residues impact sickle hemoglobin polymerization by perturbing a network of coupled interactions.

Srijita Banerjee1, Neda Mirsamadi, Lavanya Anantharaman, Mylavarapu V S Sivaram, Rasik B Gupta, Devapriya Choudhury, Rajendra P Roy.   

Abstract

The identity of intermolecular contact residues in sickle hemoglobin (HbS) fiber is largely known. However, our knowledge about combinatorial effects of two or more contact sites or the mechanistic basis of such effects is rather limited. Lys16, His20, and Glu23 of the alpha-chain occur in intra-double strand axial contacts in the sickle hemoglobin (HbS) fiber. Here we have constructed two novel double mutants, HbS (K16Q/E23Q) and (H20Q/E23Q), with a view to delineate cumulative impact of interactions emanating from the above contact sites. Far-UV and visible region CD spectra of the double mutants were similar to the native HbS indicating the presence of native-like secondary and tertiary structure in the mutants. The quaternary structures in both the mutants were also preserved as judged by the derivative UV spectra of liganded (oxy) and unliganded (deoxy) forms of the double mutants. However, the double mutants displayed interesting polymerization behavior. The polymerization behaviour of the double mutants was found to be non-additive of the individual single mutants. While HbS (H20Q/E23Q) showed inhibitory effect similar to that of HbS (E23Q), the intrinsic inhibitory propensity of the associated single mutants was totally quelled in HbS (K16Q/E23Q) double mutant. Molecular dynamics (MD) simulations studies of the isolated alpha-chains as well as a module of the fiber containing the double and associated single mutants suggested that these contact sites at the axial interface of the fiber impact HbS polymerization through a coupled interaction network. The overall results demonstrate a subtle role of dynamics and electrostatics in the polymer formation and provide insights about interaction-linkage in HbS fiber assembly.

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Year:  2007        PMID: 17514412     DOI: 10.1007/s10930-007-9084-1

Source DB:  PubMed          Journal:  Protein J        ISSN: 1572-3887            Impact factor:   2.371


  22 in total

1.  Sickle hemoglobin polymer stability probed by triple and quadruple mutant hybrids.

Authors:  Xianfeng Li; Robin W Briehl; Robert M Bookchin; Robert Josephs; Baoyang Wei; James M Manning; Frank A Ferrone
Journal:  J Biol Chem       Date:  2002-01-08       Impact factor: 5.157

2.  Structure validation by Calpha geometry: phi,psi and Cbeta deviation.

Authors:  Simon C Lovell; Ian W Davis; W Bryan Arendall; Paul I W de Bakker; J Michael Word; Michael G Prisant; Jane S Richardson; David C Richardson
Journal:  Proteins       Date:  2003-02-15

3.  Pair-wise interactions of polymerization inhibitory contact site mutations of hemoglobin-S.

Authors:  Sonati Srinivasulu; Krishnaveni Perumalsamy; Rajendra Upadhya; Belur N Manjula; Steven Feiring; Raouf Alami; Eric Bouhassira; Mary E Fabry; Ronald L Nagel; A Seetharama Acharya
Journal:  Protein J       Date:  2006-12       Impact factor: 2.371

4.  A recombinant sickle hemoglobin triple mutant with independent inhibitory effects on polymerization.

Authors:  J P Himanen; U A Mirza; B T Chait; R M Bookchin; J M Manning
Journal:  J Biol Chem       Date:  1996-10-11       Impact factor: 5.157

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Journal:  Methods Enzymol       Date:  1994       Impact factor: 1.600

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Authors:  E Bucci
Journal:  Methods Enzymol       Date:  1981       Impact factor: 1.600

7.  The effects of alpha chain mutations cis and trans to the beta6 mutation on the polymerization of sickle cell haemoglobin.

Authors:  R E Benesch; S Kwong; R Benesch
Journal:  Nature       Date:  1982-09-16       Impact factor: 49.962

8.  Beta-chain contact sites in the haemoglobin S polymer.

Authors:  R L Nagel; J Johnson; R M Bookchin; M C Garel; J Rosa; G Schiliro; H Wajcman; D Labie; W Moo-Penn; O Castro
Journal:  Nature       Date:  1980-02-28       Impact factor: 49.962

9.  Mutational analysis of sickle haemoglobin (Hb) gelation.

Authors:  X Li; J P Himanen; J J Martin de Llano; J C Padovan; B T Chait; J M Manning
Journal:  Biotechnol Appl Biochem       Date:  1999-04       Impact factor: 2.431

10.  Linkage of interactions in sickle hemoglobin fiber assembly: inhibitory effect emanating from mutations in the AB region of the alpha-chain is annulled by a mutation at its EF corner.

Authors:  Rajamani Sudha; Lavanya Anantharaman; Mylavarapu V S Sivaram; Neda Mirsamadi; Devapriya Choudhury; Nirmal K Lohiya; Rasik B Gupta; Rajendra P Roy
Journal:  J Biol Chem       Date:  2004-02-23       Impact factor: 5.157

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  1 in total

1.  Sickle Cell Hemoglobin with Mutation at αHis-50 Has Improved Solubility.

Authors:  Ming F Tam; Tsuey Chyi S Tam; Virgil Simplaceanu; Nancy T Ho; Ming Zou; Chien Ho
Journal:  J Biol Chem       Date:  2015-07-16       Impact factor: 5.157

  1 in total

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