Literature DB >> 17510163

Alzforum and SWAN: the present and future of scientific web communities.

Tim Clark1, June Kinoshita.   

Abstract

Scientists drove the early development of the World Wide Web, primarily as a means for rapid communication, document sharing and data access. They have been far slower to adopt the web as a medium for building research communities. Yet, web-based communities hold great potential for accelerating the pace of scientific research. In this article, we will describe the 10-year experience of the Alzheimer Research Forum ('Alzforum'), a unique example of a thriving scientific web community, and explain the features that contributed to its success. We will then outline the SWAN (Semantic Web Applications in Neuromedicine) project, in which Alzforum curators are collaborating with informatics researchers to develop novel approaches that will enable communities to share richly contextualized information about scientific data, claims and hypotheses.

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Year:  2007        PMID: 17510163     DOI: 10.1093/bib/bbm012

Source DB:  PubMed          Journal:  Brief Bioinform        ISSN: 1467-5463            Impact factor:   11.622


  17 in total

1.  Approaches to neuroscience data integration.

Authors:  Kei-Hoi Cheung; Ernest Lim; Matthias Samwald; Huajun Chen; Luis Marenco; Matthew E Holford; Thomas M Morse; Pradeep Mutalik; Gordon M Shepherd; Perry L Miller
Journal:  Brief Bioinform       Date:  2009-07       Impact factor: 11.622

2.  Bringing Web 2.0 to bioinformatics.

Authors:  Zhang Zhang; Kei-Hoi Cheung; Jeffrey P Townsend
Journal:  Brief Bioinform       Date:  2008-10-08       Impact factor: 11.622

3.  The SWAN biomedical discourse ontology.

Authors:  Paolo Ciccarese; Elizabeth Wu; Gwen Wong; Marco Ocana; June Kinoshita; Alan Ruttenberg; Tim Clark
Journal:  J Biomed Inform       Date:  2008-05-04       Impact factor: 6.317

4.  Paradigm shift or annoying distraction: emerging implications of web 2.0 for clinical practice.

Authors:  H Spallek; J O'Donnell; M Clayton; P Anderson; A Krueger
Journal:  Appl Clin Inform       Date:  2010-04-21       Impact factor: 2.342

Review 5.  Harnessing endophenotypes and network medicine for Alzheimer's drug repurposing.

Authors:  Jiansong Fang; Andrew A Pieper; Ruth Nussinov; Garam Lee; Lynn Bekris; James B Leverenz; Jeffrey Cummings; Feixiong Cheng
Journal:  Med Res Rev       Date:  2020-07-13       Impact factor: 12.944

6.  Finding the Evidence Base Using Citation Networks: Do 300 to 400 US Physicians Die by Suicide Annually?

Authors:  Tiffany I Leung; Sima Pendharkar; Chwen-Yuen Angie Chen; Michel Dumontier
Journal:  J Gen Intern Med       Date:  2020-05-27       Impact factor: 5.128

7.  Concept annotation in the CRAFT corpus.

Authors:  Michael Bada; Miriam Eckert; Donald Evans; Kristin Garcia; Krista Shipley; Dmitry Sitnikov; William A Baumgartner; K Bretonnel Cohen; Karin Verspoor; Judith A Blake; Lawrence E Hunter
Journal:  BMC Bioinformatics       Date:  2012-07-09       Impact factor: 3.169

8.  Open semantic annotation of scientific publications using DOMEO.

Authors:  Paolo Ciccarese; Marco Ocana; Tim Clark
Journal:  J Biomed Semantics       Date:  2012-04-24

9.  Structuring and extracting knowledge for the support of hypothesis generation in molecular biology.

Authors:  Marco Roos; M Scott Marshall; Andrew P Gibson; Martijn Schuemie; Edgar Meij; Sophia Katrenko; Willem Robert van Hage; Konstantinos Krommydas; Pieter W Adriaans
Journal:  BMC Bioinformatics       Date:  2009-10-01       Impact factor: 3.169

10.  Community annotation in biology.

Authors:  Raja Mazumder; Darren A Natale; Jessica Anne Ecalnir Julio; Lai-Su Yeh; Cathy H Wu
Journal:  Biol Direct       Date:  2010-02-18       Impact factor: 4.540

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