Literature DB >> 17502240

Looking into live cells with in-cell NMR spectroscopy.

Philipp Selenko1, Gerhard Wagner.   

Abstract

In-cell NMR spectroscopy has gained recent popularity since it provides means to analyze the conformational and functional properties of proteins inside living cells and at atomic resolution. High-resolution in-cell NMR spectroscopy was originally established in bacterial cells and based on a rationale that relies on protein over-expression and sample analysis within the same cellular environment. Here, we review in-cell NMR approaches in Xenopus laevis oocytes and evaluate potential future applications in other eukaryotic cell types.

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Year:  2007        PMID: 17502240     DOI: 10.1016/j.jsb.2007.04.001

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  43 in total

1.  NMR protein structure determination in living E. coli cells using nonlinear sampling.

Authors:  Teppei Ikeya; Atsuko Sasaki; Daisuke Sakakibara; Yoshiki Shigemitsu; Junpei Hamatsu; Tomomi Hanashima; Masaki Mishima; Masatoshi Yoshimasu; Nobuhiro Hayashi; Tsutomu Mikawa; Daniel Nietlispach; Markus Wälchli; Brian O Smith; Masahiro Shirakawa; Peter Güntert; Yutaka Ito
Journal:  Nat Protoc       Date:  2010-05-13       Impact factor: 13.491

2.  Cobalt-based paramagnetic probe to study RNA-protein interactions by NMR.

Authors:  Leah M Seebald; Christopher M DeMott; Srivathsan Ranganathan; Papa Nii Asare-Okai; Anastasia Glazunova; Alan Chen; Alexander Shekhtman; Maksim Royzen
Journal:  J Inorg Biochem       Date:  2017-02-24       Impact factor: 4.155

3.  Algal autolysate medium to label proteins for NMR in mammalian cells.

Authors:  Carmelo Fuccio; Enrico Luchinat; Letizia Barbieri; Sara Neri; Marco Fragai
Journal:  J Biomol NMR       Date:  2016-04-22       Impact factor: 2.835

Review 4.  Intrinsically disordered proteins in crowded milieu: when chaos prevails within the cellular gumbo.

Authors:  Alexander V Fonin; April L Darling; Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2018-07-31       Impact factor: 9.261

5.  Exploring weak, transient protein--protein interactions in crowded in vivo environments by in-cell nuclear magnetic resonance spectroscopy.

Authors:  Qinghua Wang; Anastasia Zhuravleva; Lila M Gierasch
Journal:  Biochemistry       Date:  2011-10-05       Impact factor: 3.162

6.  HNCA+, HNCO+, and HNCACB+ experiments: improved performance by simultaneous detection of orthogonal coherence transfer pathways.

Authors:  Sergio Gil-Caballero; Adrien Favier; Bernhard Brutscher
Journal:  J Biomol NMR       Date:  2014-07-24       Impact factor: 2.835

Review 7.  Applications of NMR spectroscopy to systems biochemistry.

Authors:  Teresa W-M Fan; Andrew N Lane
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2016-02-06       Impact factor: 9.795

8.  Investigation of higher-order RNA G-quadruplex structures in vitro and in living cells by 19F NMR spectroscopy.

Authors:  Hong-Liang Bao; Yan Xu
Journal:  Nat Protoc       Date:  2018-03-08       Impact factor: 13.491

Review 9.  The lipid network.

Authors:  Marc-Antoine Sani; Frances Separovic; John D Gehman
Journal:  Biophys Rev       Date:  2012-03-24

10.  Characterization of proteins by in-cell NMR spectroscopy in cultured mammalian cells.

Authors:  Letizia Barbieri; Enrico Luchinat; Lucia Banci
Journal:  Nat Protoc       Date:  2016-05-19       Impact factor: 13.491

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