Literature DB >> 17500931

Regularizing capacity of metabolic networks.

Carsten Marr1, Mark Müller-Linow, Marc-Thorsten Hütt.   

Abstract

Despite their topological complexity almost all functional properties of metabolic networks can be derived from steady-state dynamics. Indeed, many theoretical investigations (like flux-balance analysis) rely on extracting function from steady states. This leads to the interesting question as to how metabolic networks avoid complex dynamics and maintain a steady-state behavior. Here, we expose metabolic network topologies to binary dynamics generated by simple local rules. We find that the networks' response is highly specific: Complex dynamics are systematically reduced on metabolic networks compared to randomized networks with identical degree sequences. Already small topological modifications substantially enhance the capacity of a network to host complex dynamic behavior and thus reduce its regularizing potential. This exceptionally pronounced regularization of dynamics encoded in the topology may explain why steady-state behavior is ubiquitous in metabolism.

Mesh:

Year:  2007        PMID: 17500931     DOI: 10.1103/PhysRevE.75.041917

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  5 in total

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Journal:  Entropy (Basel)       Date:  2020-06-06       Impact factor: 2.524

  5 in total

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