Literature DB >> 17496333

Mapping genetic loci that regulate lipid levels in a NZB/B1NJxRF/J intercross and a combined intercross involving NZB/B1NJ, RF/J, MRL/MpJ, and SJL/J mouse strains.

Jon E Wergedal1, Cheryl L Ackert-Bicknell, Wesley G Beamer, Subburaman Mohan, David J Baylink, Apurva K Srivastava.   

Abstract

The NZB/B1NJ (NZB) mouse strain exhibits high cholesterol and HDL levels in blood compared with several other strains of mice. To study the genetic regulation of blood lipid levels, we performed a genome-wide linkage analysis in 542 chow-fed F2 female mice from an NZBxRF/J (RF) intercross and in a combined data set that included NZBxRF and MRL/MpJxSJL/J intercrosses. In the NZBxRF F2 mice, the cholesterol and HDL concentrations were influenced by quantitative trait loci (QTL) on chromosome (Chr) 5 [logarithm of odds (LOD) 17-19; D5Mit10] that was in the region identified earlier in crosses involving NZB mice, but two QTLs on Chr 12 (LOD 4.7; D12Mit182) and Chr 19 (LOD 5.7; D19Mit1) were specific to the NZBxRF intercross. Triglyceride levels were affected by two novel QTLs at D12Mit182 (LOD 8.7) and D15Mit13 (LOD 3.5). The combined-cross linkage analysis (1,054 mice, 231 markers) 1) identified four shared QTLs (Chrs 5, 7, 14, and 17) that were not detected in one of the parental crosses and 2) improved the resolution of two shared QTLs. In summary, we report additional loci regulating lipid levels in NZB mice that had not been identified earlier in crosses involving the NZB strain of mice. The identification of shared loci from multiple crosses increases confidence toward finding the QTL gene.

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Year:  2007        PMID: 17496333     DOI: 10.1194/jlr.M700015-JLR200

Source DB:  PubMed          Journal:  J Lipid Res        ISSN: 0022-2275            Impact factor:   5.922


  16 in total

1.  Four additional mouse crosses improve the lipid QTL landscape and identify Lipg as a QTL gene.

Authors:  Zhiguang Su; Naoki Ishimori; Yaoyu Chen; Edward H Leiter; Gary A Churchill; Beverly Paigen; Ioannis M Stylianou
Journal:  J Lipid Res       Date:  2009-05-12       Impact factor: 5.922

Review 2.  HDL cholesterol and bone mineral density: is there a genetic link?

Authors:  Cheryl L Ackert-Bicknell
Journal:  Bone       Date:  2012-02       Impact factor: 4.398

3.  Recalculation of 23 mouse HDL QTL datasets improves accuracy and allows for better candidate gene analysis.

Authors:  Cheryl Ackert-Bicknell; Beverly Paigen; Ron Korstanje
Journal:  J Lipid Res       Date:  2013-02-07       Impact factor: 5.922

4.  High-resolution genetic mapping using the Mouse Diversity outbred population.

Authors:  Karen L Svenson; Daniel M Gatti; William Valdar; Catherine E Welsh; Riyan Cheng; Elissa J Chesler; Abraham A Palmer; Leonard McMillan; Gary A Churchill
Journal:  Genetics       Date:  2012-02       Impact factor: 4.562

5.  A systems genetic analysis of high density lipoprotein metabolism and network preservation across mouse models.

Authors:  Peter Langfelder; Lawrence W Castellani; Zhiqiang Zhou; Eric Paul; Richard Davis; Eric E Schadt; Aldons J Lusis; Steve Horvath; Margarete Mehrabian
Journal:  Biochim Biophys Acta       Date:  2011-07-23

6.  Untangling HDL quantitative trait loci on mouse chromosome 5 and identifying Scarb1 and Acads as the underlying genes.

Authors:  Zhiguang Su; Magalie S Leduc; Ron Korstanje; Beverly Paigen
Journal:  J Lipid Res       Date:  2010-06-19       Impact factor: 5.922

7.  Practical applications of the bioinformatics toolbox for narrowing quantitative trait loci.

Authors:  Sarah L Burgess-Herbert; Allison Cox; Shirng-Wern Tsaih; Beverly Paigen
Journal:  Genetics       Date:  2008-10-09       Impact factor: 4.562

8.  Differences in DBA/1J and DBA/2J reveal lipid QTL genes.

Authors:  Ioannis M Stylianou; Sarah R Langley; Kenneth Walsh; Yuan Chen; Céline Revenu; Beverly Paigen
Journal:  J Lipid Res       Date:  2008-05-23       Impact factor: 5.922

9.  Genetic Architecture of Atherosclerosis in Mice: A Systems Genetics Analysis of Common Inbred Strains.

Authors:  Brian J Bennett; Richard C Davis; Mete Civelek; Luz Orozco; Judy Wu; Hannah Qi; Calvin Pan; René R Sevag Packard; Eleazar Eskin; Mujing Yan; Todd Kirchgessner; Zeneng Wang; Xinmin Li; Jill C Gregory; Stanley L Hazen; Peter S Gargalovic; Aldons J Lusis
Journal:  PLoS Genet       Date:  2015-12-22       Impact factor: 5.917

10.  Identification of a novel polymorphism in X-linked sterol-4-alpha-carboxylate 3-dehydrogenase (Nsdhl) associated with reduced high-density lipoprotein cholesterol levels in I/LnJ mice.

Authors:  David J Bautz; Karl W Broman; David W Threadgill
Journal:  G3 (Bethesda)       Date:  2013-10-03       Impact factor: 3.154

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