Literature DB >> 17492451

High efficiency poplar transformation.

Leland J Cseke1, Sarah Beth Cseke, Gopi K Podila.   

Abstract

With the completion of the poplar tree genome database, Populus species have become one of the most useful model systems for the study of woody plant biology. Populus tremuloides (quaking aspen) is the most wide-spread tree species in North America, and its rapid growth generates the most abundant wood-based biomass out of any other plant species. To study such beneficial traits, there is a need for easier and more efficient transformation procedures that will allow the study of large numbers of tree genes. We have developed transformation procedures that are suitable for high-throughput format transformations using either Agrobacterium tumefaciens to produce transformed trees or Agrobacterium rhizogenes to generate hairy roots. Our method uses Agrobacterium inoculated aspen seedling hypocotyls followed by direct thidiazuron (TDZ)-mediated shoot regeneration on selective media. Transformation was verified through beta-glucuronidase (GUS) reporter gene expression in all tree tissues, PCR amplification of appropriate vector products from isolated genomic DNA, and northern hybridization of incorporated and expressed transgenes. The hairy root protocol follows the same inoculation procedures and was tested using GUS reporter gene integration and antibiotic selection. The benefit of these procedures is that they are simple and efficient, requiring no maintenance of starting materials and allowing fully formed transgenic trees (or hairy roots) to be generated in only 3-4 months, rather than the 6-12 months required by more traditional methods. Likewise, the fact that the protocols are amenable to high-throughput formats makes them better suited for large-scale functional genomics studies in poplars.

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Year:  2007        PMID: 17492451     DOI: 10.1007/s00299-007-0365-0

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  12 in total

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2.  Mycorrhizal symbionts of Populus to be sequenced by the United States Department of Energy's Joint Genome Institute.

Authors:  P Lammers; G A Tuskan; S P DiFazio; G K Podila; F Martin
Journal:  Mycorrhiza       Date:  2003-12-20       Impact factor: 3.387

3.  A gateway cloning vector set for high-throughput functional analysis of genes in planta.

Authors:  Mark D Curtis; Ueli Grossniklaus
Journal:  Plant Physiol       Date:  2003-10       Impact factor: 8.340

4.  The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).

Authors:  G A Tuskan; S Difazio; S Jansson; J Bohlmann; I Grigoriev; U Hellsten; N Putnam; S Ralph; S Rombauts; A Salamov; J Schein; L Sterck; A Aerts; R R Bhalerao; R P Bhalerao; D Blaudez; W Boerjan; A Brun; A Brunner; V Busov; M Campbell; J Carlson; M Chalot; J Chapman; G-L Chen; D Cooper; P M Coutinho; J Couturier; S Covert; Q Cronk; R Cunningham; J Davis; S Degroeve; A Déjardin; C Depamphilis; J Detter; B Dirks; I Dubchak; S Duplessis; J Ehlting; B Ellis; K Gendler; D Goodstein; M Gribskov; J Grimwood; A Groover; L Gunter; B Hamberger; B Heinze; Y Helariutta; B Henrissat; D Holligan; R Holt; W Huang; N Islam-Faridi; S Jones; M Jones-Rhoades; R Jorgensen; C Joshi; J Kangasjärvi; J Karlsson; C Kelleher; R Kirkpatrick; M Kirst; A Kohler; U Kalluri; F Larimer; J Leebens-Mack; J-C Leplé; P Locascio; Y Lou; S Lucas; F Martin; B Montanini; C Napoli; D R Nelson; C Nelson; K Nieminen; O Nilsson; V Pereda; G Peter; R Philippe; G Pilate; A Poliakov; J Razumovskaya; P Richardson; C Rinaldi; K Ritland; P Rouzé; D Ryaboy; J Schmutz; J Schrader; B Segerman; H Shin; A Siddiqui; F Sterky; A Terry; C-J Tsai; E Uberbacher; P Unneberg; J Vahala; K Wall; S Wessler; G Yang; T Yin; C Douglas; M Marra; G Sandberg; Y Van de Peer; D Rokhsar
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7.  Agrobacterium rhizogenes-transformed roots of Medicago truncatula for the study of nitrogen-fixing and endomycorrhizal symbiotic associations.

Authors:  A Boisson-Dernier; M Chabaud; F Garcia; G Bécard; C Rosenberg; D G Barker
Journal:  Mol Plant Microbe Interact       Date:  2001-06       Impact factor: 4.171

8.  Identification of PTM5 protein interaction partners, a MADS-box gene involved in aspen tree vegetative development.

Authors:  Leland J Cseke; Namritha Ravinder; Ajay K Pandey; Gopi K Podila
Journal:  Gene       Date:  2007-01-19       Impact factor: 3.688

9.  Transgenic poplars: expression of chimeric genes using four different constructs.

Authors:  J C Leple; A C Brasileiro; M F Michel; F Delmotte; L Jouanin
Journal:  Plant Cell Rep       Date:  1992-04       Impact factor: 4.570

10.  GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants.

Authors:  R A Jefferson; T A Kavanagh; M W Bevan
Journal:  EMBO J       Date:  1987-12-20       Impact factor: 11.598

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  12 in total

1.  Overexpression of AtSTO1 leads to improved salt tolerance in Populus tremula × P. alba.

Authors:  Shaneka S Lawson; Charles H Michler
Journal:  Transgenic Res       Date:  2014-06-15       Impact factor: 2.788

2.  Agrobacterium rhizogenes-mediated transformation of Prunus as an alternative for gene functional analysis in hairy-roots and composite plants.

Authors:  Nathalie Bosselut; Cyril Van Ghelder; Michel Claverie; Roger Voisin; Jean-Paul Onesto; Marie-Noëlle Rosso; Daniel Esmenjaud
Journal:  Plant Cell Rep       Date:  2011-03-17       Impact factor: 4.570

Review 3.  Engineering crassulacean acid metabolism to improve water-use efficiency.

Authors:  Anne M Borland; James Hartwell; David J Weston; Karen A Schlauch; Timothy J Tschaplinski; Gerald A Tuskan; Xiaohan Yang; John C Cushman
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5.  Improved method of in vitro regeneration in Leucaena leucocephala - a leguminous pulpwood tree species.

Authors:  Noor M Shaik; Manish Arha; A Nookaraju; Sushim K Gupta; Sameer Srivastava; Arun K Yadav; Pallavi S Kulkarni; O U Abhilash; Rishi K Vishwakarma; Somesh Singh; Rajeshri Tatkare; Kannan Chinnathambi; Shuban K Rawal; Bashir M Khan
Journal:  Physiol Mol Biol Plants       Date:  2009-12-06

6.  Agrobacterium-mediated genetic transformation of Coffea arabica (L.) is greatly enhanced by using established embryogenic callus cultures.

Authors:  Alessandra F Ribas; Eveline Dechamp; Anthony Champion; Benoît Bertrand; Marie-Christine Combes; Jean-Luc Verdeil; Fabienne Lapeyre; Philippe Lashermes; Hervé Etienne
Journal:  BMC Plant Biol       Date:  2011-05-19       Impact factor: 4.215

7.  Using next generation transcriptome sequencing to predict an ectomycorrhizal metabolome.

Authors:  Peter E Larsen; Avinash Sreedasyam; Geetika Trivedi; Gopi K Podila; Leland J Cseke; Frank R Collart
Journal:  BMC Syst Biol       Date:  2011-05-13

8.  Multidimensional High-Resolution Magic Angle Spinning and Solution-State NMR Characterization of (13)C-labeled Plant Metabolites and Lignocellulose.

Authors:  Tetsuya Mori; Yuuri Tsuboi; Nobuhiro Ishida; Nobuyuki Nishikubo; Taku Demura; Jun Kikuchi
Journal:  Sci Rep       Date:  2015-07-06       Impact factor: 4.379

9.  Simple, rapid and efficient transformation of genotype Nisqually-1: a basic tool for the first sequenced model tree.

Authors:  Shujuan Li; Cheng Zhen; Wenjing Xu; Chong Wang; Yuxiang Cheng
Journal:  Sci Rep       Date:  2017-06-01       Impact factor: 4.379

10.  Efficient Agrobacterium-Mediated Transformation of Hybrid Poplar Populus davidiana Dode x Populus bollena Lauche.

Authors:  Xue Han; Shurong Ma; Xianghui Kong; Tetsuo Takano; Shenkui Liu
Journal:  Int J Mol Sci       Date:  2013-01-25       Impact factor: 5.923

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