Literature DB >> 17490851

Screening for novel human genes associated with CRE pathway activation with cell microarray.

Linjie Tian1, Pingzhang Wang, Jinhai Guo, Xinyu Wang, Weiwei Deng, Chenying Zhang, Dongxu Fu, Xia Gao, Taiping Shi, Dalong Ma.   

Abstract

In this study, cell microarray technology is used to identify novel human genes associated with CRE pathway activation. By reverse transfection, expression plasmids containing full-length cDNAs were cotransfected with the reporter plasmid pCRE-d2EGFP to monitor the activation of the CRE pathway via enhanced green fluorescence protein (EGFP) expression. Of the 575 predominantly novel genes screened, 22 exhibited relatively higher EGFP fluorescence compared with a negative control. After a functional validation with a dual luciferase reporter system that included both cis- and trans-luciferase assays, 4 of the 22 genes (RNF41, C8orf32, C6orf208, and MEIS3P1) were confirmed as CRE-pathway activators. Western blot analysis revealed that RNF41 can promote CREB phosphorylation. These results demonstrate the successful combination of cell microarray technology with this reporting system and the potential of this tool to characterize functions of novel genes in a highly parallel format.

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Year:  2007        PMID: 17490851     DOI: 10.1016/j.ygeno.2007.02.004

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  5 in total

1.  Glutamine-specific N-terminal amidase, a component of the N-end rule pathway.

Authors:  Haiqing Wang; Konstantin I Piatkov; Christopher S Brower; Alexander Varshavsky
Journal:  Mol Cell       Date:  2009-06-26       Impact factor: 17.970

2.  Microarray transfection analysis of conserved genomic sequences from three immediate early genes.

Authors:  Xiaomei Ren; Michael D Uhler
Journal:  Genomics       Date:  2008-11-08       Impact factor: 5.736

3.  CCDC134 is down-regulated in gastric cancer and its silencing promotes cell migration and invasion of GES-1 and AGS cells via the MAPK pathway.

Authors:  Jialing Zhong; Mei Zhao; Qing Luo; Yiming Ma; Jian Liu; Jia Wang; Mei Yang; Xinghua Yuan; Jianli Sang; Changzhi Huang
Journal:  Mol Cell Biochem       Date:  2012-08-18       Impact factor: 3.396

4.  Optimizing cell arrays for accurate functional genomics.

Authors:  Sven Fengler; Philippe I H Bastiaens; Hernán E Grecco; Pedro Roda-Navarro
Journal:  BMC Res Notes       Date:  2012-07-17

5.  Functional studies on transfected cell microarray analysed by linear regression modelling.

Authors:  Christina Saeten Fjeldbo; Kristine Misund; Clara-Cecilie Günther; Mette Langaas; Tonje Strømmen Steigedal; Liv Thommesen; Astrid Laegreid; Torunn Bruland
Journal:  Nucleic Acids Res       Date:  2008-07-15       Impact factor: 16.971

  5 in total

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