Literature DB >> 17490750

A convenient and efficient protocol for isolating high-quality RNA from latex of Hevea brasiliensis (para rubber tree).

Chaorong Tang1, Jiyan Qi, Heping Li, Cunliang Zhang, Yuekun Wang.   

Abstract

Isolating high-quality RNA from latex of H. brasiliensis is a prerequisite to elucidating the molecular mechanisms of rubber biosynthesis and its regulation. Here, an improved protocol was developed for latex collection, transportation, storage, and RNA isolation. Compared with existing ones, our protocol eliminated liquid nitrogen for latex collection and subsequent low-temperature (-70 degrees C) condition for latex storage, making it more convenient and feasible when latex was collected in remote sampling sites, and latex storage and RNA isolation were conducted in poorly-equipped laboratories. Different methods (UV absorbance scans, denaturing gel electrophoresis, autoradiograph monitoring of cDNA synthesis) were used to confirm the high quality of the RNA prepared with this protocol, whose usefulness was further verified by several practical applications, including construction of one high-quality cDNA library, cloning of the full-length cDNAs of 3 novel Hevea sucrose transporter genes, and semi-quantitative RT-PCR analysis of two rubber-biosynthesis essential genes and one sucrose transporter gene.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17490750     DOI: 10.1016/j.jbbm.2007.04.002

Source DB:  PubMed          Journal:  J Biochem Biophys Methods        ISSN: 0165-022X


  34 in total

Review 1.  Suppression Subtractive Hybridization Versus Next-Generation Sequencing in Plant Genetic Engineering: Challenges and Perspectives.

Authors:  Mahbod Sahebi; Mohamed M Hanafi; Parisa Azizi; Abdul Hakim; Sadegh Ashkani; Rambod Abiri
Journal:  Mol Biotechnol       Date:  2015-10       Impact factor: 2.695

2.  Molecular and functional characterization of the HbSRPP promoter in response to hormones and abiotic stresses.

Authors:  Dong Guo; Hui-Liang Li; Xiao Tang; Shi-Qing Peng
Journal:  Transgenic Res       Date:  2013-09-17       Impact factor: 2.788

3.  RNA-Seq analysis and de novo transcriptome assembly of Hevea brasiliensis.

Authors:  Zhihui Xia; Huimin Xu; Jinling Zhai; Dejun Li; Hongli Luo; Chaozu He; Xi Huang
Journal:  Plant Mol Biol       Date:  2011-08-03       Impact factor: 4.076

4.  Age-dependent and jasmonic acid-induced laticifer-cell differentiation in anther callus cultures of rubber tree.

Authors:  Deguan Tan; Xuepiao Sun; Jiaming Zhang
Journal:  Planta       Date:  2014-05-20       Impact factor: 4.116

5.  Identification of histone methylation modifiers and their expression patterns during somatic embryogenesis in Hevea brasiliensis.

Authors:  Hui-Liang Li; Dong Guo; Jia-Hong Zhu; Ying Wang; Shi-Qing Peng
Journal:  Genet Mol Biol       Date:  2020-02-17       Impact factor: 1.771

6.  Characterization of HbEREBP1, a wound-responsive transcription factor gene in laticifers of Hevea brasiliensis Muell. Arg.

Authors:  Yue-Yi Chen; Li-Feng Wang; Long-Jun Dai; Shu-Guang Yang; Wei-Min Tian
Journal:  Mol Biol Rep       Date:  2011-07-15       Impact factor: 2.316

7.  Molecular characterization of a thioredoxin h gene (HbTRX1) from Hevea brasiliensis showing differential expression in latex between self-rooting juvenile clones and donor clones.

Authors:  Hui-Liang Li; Hui-Zhong Lu; Dong Guo; Wei-Min Tian; Shi-Qing Peng
Journal:  Mol Biol Rep       Date:  2010-09-21       Impact factor: 2.316

8.  Three MADS-box genes of Hevea brasiliensis expressed during somatic embryogenesis and in the laticifer cells.

Authors:  Hui-Liang Li; Ying Wang; Dong Guo; Wei-Min Tian; Shi-Qing Peng
Journal:  Mol Biol Rep       Date:  2010-11-24       Impact factor: 2.316

9.  Cloning and characterization of a novel cysteine protease gene (HbCP1) from Hevea brasiliensis.

Authors:  Shi-Qing Peng; Jia-Hong Zhu; Hui-Liang Li; Wei-Min Tian
Journal:  J Biosci       Date:  2008-12       Impact factor: 1.826

10.  A silver-staining cDNA-AFLP protocol suitable for transcript profiling in the latex of Hevea brasiliensis (para rubber tree).

Authors:  Xiaohu Xiao; Heping Li; Chaorong Tang
Journal:  Mol Biotechnol       Date:  2008-12-20       Impact factor: 2.695

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.