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Literature DB >> 17487522

The variance of coalescent time estimates from DNA sequences.

Abstract

A method for estimating the variance of a simple estimate of the time of the most recent common ancestor of a sample of sequences is described.

Mesh：

Year: 2007 PMID： 17487522 DOI： 10.1007/s00239-006-0261-1

Source DB: PubMed Journal: J Mol Evol ISSN： 0022-2844 Impact factor: 2.395

6 in total

1. Recent common ancestry of human Y chromosomes: evidence from DNA sequence data.

Authors: R Thomson; J K Pritchard; P Shen; P J Oefner; M W Feldman
Journal: Proc Natl Acad Sci U S A Date: 2000-06-20 Impact factor: 11.205

2. DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis.

Authors: J Rozas; R Rozas
Journal: Bioinformatics Date: 1999-02 Impact factor: 6.937

Review 3. Estimating allele age.

Authors: M Slatkin; B Rannala
Journal: Annu Rev Genomics Hum Genet Date: 2000 Impact factor: 8.929

4. Frequentist estimation of coalescence times from nucleotide sequence data using a tree-based partition.

Authors: Hua Tang; David O Siegmund; Peidong Shen; Peter J Oefner; Marcus W Feldman
Journal: Genetics Date: 2002-05 Impact factor: 4.562

5. Maximum-likelihood estimation of coalescence times in genealogical trees.

Authors: Loukia Meligkotsidou; Paul Fearnhead
Journal: Genetics Date: 2005-08-05 Impact factor: 4.562

6. Inferring coalescence times from DNA sequence data.

Authors: S Tavaré; D J Balding; R C Griffiths; P Donnelly
Journal: Genetics Date: 1997-02 Impact factor: 4.562

6 in total

14 in total

1. Identification of a functional transposon insertion in the maize domestication gene tb1.

Authors: Anthony Studer; Qiong Zhao; Jeffrey Ross-Ibarra; John Doebley
Journal: Nat Genet Date: 2011-09-25 Impact factor: 38.330

2. The long-term maintenance of a resistance polymorphism through diffuse interactions.

Authors: Talia L Karasov; Joel M Kniskern; Liping Gao; Brody J DeYoung; Jing Ding; Ullrich Dubiella; Ruben O Lastra; Sumitha Nallu; Fabrice Roux; Roger W Innes; Luke G Barrett; Richard R Hudson; Joy Bergelson
Journal: Nature Date: 2014-07-06 Impact factor: 49.962

3. Megabase-scale inversion polymorphism in the wild ancestor of maize.

Authors: Zhou Fang; Tanja Pyhäjärvi; Allison L Weber; R Kelly Dawe; Jeffrey C Glaubitz; José de Jesus Sánchez González; Claudia Ross-Ibarra; John Doebley; Peter L Morrell; Jeffrey Ross-Ibarra
Journal: Genetics Date: 2012-04-27 Impact factor: 4.562

Review 4. Searching for Sympatric Speciation in the Genomic Era.

Authors: Emilie J Richards; Maria R Servedio; Christopher H Martin
Journal: Bioessays Date: 2019-07 Impact factor: 4.345

5. Evolutionary history and adaptation from high-coverage whole-genome sequences of diverse African hunter-gatherers.

Authors: Joseph Lachance; Benjamin Vernot; Clara C Elbers; Bart Ferwerda; Alain Froment; Jean-Marie Bodo; Godfrey Lema; Wenqing Fu; Thomas B Nyambo; Timothy R Rebbeck; Kun Zhang; Joshua M Akey; Sarah A Tishkoff
Journal: Cell Date: 2012-07-26 Impact factor: 41.582

6. From many, one: genetic control of prolificacy during maize domestication.

Authors: David M Wills; Clinton J Whipple; Shohei Takuno; Lisa E Kursel; Laura M Shannon; Jeffrey Ross-Ibarra; John F Doebley
Journal: PLoS Genet Date: 2013-06-27 Impact factor: 5.917

7. Heterogeneity in genetic diversity among non-coding loci fails to fit neutral coalescent models of population history.

Authors: Jeffrey L Peters; Trina E Roberts; Kevin Winker; Kevin G McCracken
Journal: PLoS One Date: 2012-02-22 Impact factor: 3.240