Literature DB >> 17485356

Genomic analysis of RNA alternative splicing in cancers.

Yi Xing1.   

Abstract

Alternative splicing is an important and prevalent mechanism of gene regulation in higher eukaryotes. Nearly three quarters of human multi-exon genes are alternatively spliced. There is great interest in discovering alternative splicing events in the transcriptome of cancer cells, and in understanding how alternative splicing contributes to tumorigenesis. In this article, I will review recent advances in global analyses of pre-mRNA alternative splicing, and the applications of these genomic technologies to studies of alternative splicing in human cancers.

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Year:  2007        PMID: 17485356     DOI: 10.2741/2369

Source DB:  PubMed          Journal:  Front Biosci        ISSN: 1093-4715


  7 in total

Review 1.  Regulation of chemoresistance via alternative messenger RNA splicing.

Authors:  Scott T Eblen
Journal:  Biochem Pharmacol       Date:  2012-01-08       Impact factor: 5.858

Review 2.  Evolution of SR protein and hnRNP splicing regulatory factors.

Authors:  Anke Busch; Klemens J Hertel
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-09-02       Impact factor: 9.957

3.  Identification of a novel nuclear localization signal and speckle-targeting sequence of tuftelin-interacting protein 11, a splicing factor involved in spliceosome disassembly.

Authors:  Sissada Tannukit; Tara L Crabb; Klemens J Hertel; Xin Wen; David A Jans; Michael L Paine
Journal:  Biochem Biophys Res Commun       Date:  2009-10-24       Impact factor: 3.575

4.  Revealing the Determinants of Widespread Alternative Splicing Perturbation in Cancer.

Authors:  Yongsheng Li; Nidhi Sahni; Rita Pancsa; Daniel J McGrail; Juan Xu; Xu Hua; Jasmin Coulombe-Huntington; Michael Ryan; Boranai Tychhon; Dhanistha Sudhakar; Limei Hu; Michael Tyers; Xiaoqian Jiang; Shiaw-Yih Lin; M Madan Babu; Song Yi
Journal:  Cell Rep       Date:  2017-10-17       Impact factor: 9.423

5.  Predicting functional alternative splicing by measuring RNA selection pressure from multigenome alignments.

Authors:  Hongchao Lu; Lan Lin; Seiko Sato; Yi Xing; Christopher J Lee
Journal:  PLoS Comput Biol       Date:  2009-12-18       Impact factor: 4.475

6.  CCK(2) receptor splice variant with intron 4 retention in human gastrointestinal and lung tumours.

Authors:  Meike Körner; Beatrice Waser; Jean Claude Reubi; Laurence J Miller
Journal:  J Cell Mol Med       Date:  2009-07-20       Impact factor: 5.310

Review 7.  The well-accepted notion that gene amplification contributes to increased expression still remains, after all these years, a reasonable but unproven assumption.

Authors:  Yuping Jia; Lichan Chen; Qingwen Jia; Xixi Dou; Ningzhi Xu; Dezhong Joshua Liao
Journal:  J Carcinog       Date:  2016-05-20
  7 in total

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