Literature DB >> 17482648

Complexities of human promoter sequences.

Fangcui Zhao1, Huijie Yang, Binghong Wang.   

Abstract

By means of the diffusion entropy approach, we detect the scale-invariance characteristics embedded in the 4737 human promoter sequences. The exponent for the scale-invariance is in a wide range of [0.3,0.9], which centered at delta(c)=0.66. The distribution of the exponent can be separated into left and right branches with respect to the maximum. The left and right branches are asymmetric and can be fitted exactly with Gaussian form with different widths, respectively.

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Year:  2007        PMID: 17482648     DOI: 10.1016/j.jtbi.2007.03.035

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  4 in total

1.  Evaluation of scaling invariance embedded in short time series.

Authors:  Xue Pan; Lei Hou; Mutua Stephen; Huijie Yang; Chenping Zhu
Journal:  PLoS One       Date:  2014-12-30       Impact factor: 3.240

2.  Evolution of scaling behaviors embedded in sentence series from A Story of the Stone.

Authors:  Yue Yang; Changgui Gu; Qin Xiao; Huijie Yang
Journal:  PLoS One       Date:  2017-02-14       Impact factor: 3.240

3.  Integrated entropy-based approach for analyzing exons and introns in DNA sequences.

Authors:  Junyi Li; Li Zhang; Huinian Li; Yuan Ping; Qingzhe Xu; Rongjie Wang; Renjie Tan; Zhen Wang; Bo Liu; Yadong Wang
Journal:  BMC Bioinformatics       Date:  2019-06-10       Impact factor: 3.169

4.  A generalized topological entropy for analyzing the complexity of DNA sequences.

Authors:  Shuilin Jin; Renjie Tan; Qinghua Jiang; Li Xu; Jiajie Peng; Yong Wang; Yadong Wang
Journal:  PLoS One       Date:  2014-02-12       Impact factor: 3.240

  4 in total

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