Literature DB >> 17481756

Evaluation of LSU rRNA-gene PCR primers for analysis of arbuscular mycorrhizal fungal communities via terminal restriction fragment length polymorphism analysis.

Daniel L Mummey1, Matthias C Rillig.   

Abstract

The efficacy of the LSU rDNA PCR primers FLR3 and FLR4 for discrimination of arbuscular mycorrhizal fungi communities via T-RFLP analysis was examined. Analysis of both public database and site-specific derived DNA sequences suggesting LSU rDNA-based T-RFLP analysis represents a valuable alternative for analysis of AMF communities.

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Year:  2007        PMID： 17481756     DOI： 10.1016/j.mimet.2007.04.002

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN： 0167-7012            Impact factor:   2.363


  10 in total

1.  Comparison of morphological and molecular genetic quantification of relative abundance of arbuscular mycorrhizal fungi within roots.

Authors:  P Shi; L K Abbott; N C Banning; B Zhao
Journal:  Mycorrhiza       Date:  2012-01-10       Impact factor: 3.387

2.  Microbial Community Analysis with Ribosomal Gene Fragments from Shotgun Metagenomes.

Authors:  Jiarong Guo; James R Cole; Qingpeng Zhang; C Titus Brown; James M Tiedje
Journal:  Appl Environ Microbiol       Date:  2015-10-16       Impact factor: 4.792

3.  Mechanical soil disturbance as a determinant of arbuscular mycorrhizal fungal communities in semi-natural grassland.

Authors:  Tim Krone Schnoor; Ylva Lekberg; Søren Rosendahl; Pål Axel Olsson
Journal:  Mycorrhiza       Date:  2010-07-01       Impact factor: 3.387

4.  Intraspecific variation in allelochemistry determines an invasive species' impact on soil microbial communities.

Authors:  Richard A Lankau
Journal:  Oecologia       Date:  2010-08-01       Impact factor: 3.225

5.  Mutualism breakdown in breadfruit domestication.

Authors:  Xiaoke Xing; Alexander M Koch; A Maxwell P Jones; Diane Ragone; Susan Murch; Miranda M Hart
Journal:  Proc Biol Sci       Date:  2011-09-14       Impact factor: 5.349

6.  Assessing the diversity of arbuscular mycorrhizal fungi in semiarid shrublands dominated by Artemisia tridentata ssp. wyomingensis.

Authors:  Keith A Carter; James F Smith; Merlin M White; Marcelo D Serpe
Journal:  Mycorrhiza       Date:  2013-11-19       Impact factor: 3.387

7.  Consequences of inoculation with native arbuscular mycorrhizal fungi for root colonization and survival of Artemisia tridentata ssp. wyomingensis seedlings after transplanting.

Authors:  Bill E Davidson; Stephen J Novak; Marcelo D Serpe
Journal:  Mycorrhiza       Date:  2016-04-14       Impact factor: 3.387

8.  Arbuscular mycorhizal fungi associated with the olive crop across the Andalusian landscape: factors driving community differentiation.

Authors:  Miguel Montes-Borrego; Madis Metsis; Blanca B Landa
Journal:  PLoS One       Date:  2014-05-05       Impact factor: 3.240

9.  Characterization of arbuscular mycorrhizal fungus communities of Aquilaria crassna and Tectona grandis roots and soils in Thailand plantations.

Authors:  Amornrat Chaiyasen; J Peter W Young; Neung Teaumroong; Paiboolya Gavinlertvatana; Saisamorn Lumyong
Journal:  PLoS One       Date:  2014-11-14       Impact factor: 3.240

10.  Arbuscular mycorrhizal fungi in a wetland constructed for benzene-, methyl tert-butyl ether- and ammonia-contaminated groundwater bioremediation.

Authors:  Thomas Fester
Journal:  Microb Biotechnol       Date:  2012-07-31       Impact factor: 5.813
  10 in total

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