Literature DB >> 17478118

Differential regulation of the yeast isozymes of pyruvate carboxylase and the locus of action of acetyl CoA.

Sarawut Jitrapakdee1, Abdussalam Adina-Zada, Paul G Besant, Kathy H Surinya, W Wallace Cleland, John C Wallace, Paul V Attwood.   

Abstract

Unlike other eukaryotes studied to date, yeast has two genes for pyruvate carboxylase coding for very similar, but not identical, isozymes (Pyc1 and Pyc2), both of which are located in the cytoplasm. We have found that there are marked differences in the kinetic properties of the isozymes potentially leading to differential regulation of Pyc1 and Pyc2 activity by both activators and substrates. For example, Pyc2 is only activated 3.7-fold by acetyl CoA, and 9.6-fold by NH(4)(+), whilst the figures for Pyc1 are 16 and 14.6-fold, respectively. Pyc1 and Pyc2 display different allosteric properties with respect to acetyl CoA activation and aspartate inhibition, with Pyc1 showing a higher degree of cooperativity than Pyc2, even in the absence of aspartate. We have investigated the locus of action in the amino acid sequence of the isozymes of this activator by measuring its regulation of various chimeric constructs of the two isozymes. In this way, we conclude that the main locus of action of acetyl CoA lies in the N-terminal half of the enzyme, within the biotin-carboxylation domain, between amino acids 99 and 478 of Pyc1.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17478118      PMCID: PMC2519008          DOI: 10.1016/j.biocel.2007.03.016

Source DB:  PubMed          Journal:  Int J Biochem Cell Biol        ISSN: 1357-2725            Impact factor:   5.085


  26 in total

1.  Protein engineering of pyruvate carboxylase: investigation on the function of acetyl-CoA and the quaternary structure.

Authors:  Shinji Sueda; Md Nurul Islam; Hiroki Kondo
Journal:  Eur J Biochem       Date:  2004-04

2.  Decarboxylation of oxalacetate by pyruvate carboxylase.

Authors:  P V Attwood; W W Cleland
Journal:  Biochemistry       Date:  1986-12-16       Impact factor: 3.162

3.  Pyruvate carboxylase from chicken liver. Effects of univalent and divalent cations on catalytic activity.

Authors:  R E Barden; M C Scrutton
Journal:  J Biol Chem       Date:  1974-08-10       Impact factor: 5.157

4.  The regulation of yeast pyruvate carboxylase by acetyl-coenzyme A and L-aspartate.

Authors:  J J Cazzulo; A O Stoppani
Journal:  Arch Biochem Biophys       Date:  1968-09-20       Impact factor: 4.013

5.  Pyruvate carboxylase of Aspergillus niger: kinetic study of a biotin-containing carboxylase.

Authors:  H A Feir; I Suzuki
Journal:  Can J Biochem       Date:  1969-07

6.  Rat liver pyruvate carboxylase. I. Preparation, properties, and cation specificity.

Authors:  W R McClure; H A Lardy; H P Kneifel
Journal:  J Biol Chem       Date:  1971-06-10       Impact factor: 5.157

7.  Microcentrifuge desalting: a rapid, quantitative method for desalting small amounts of protein.

Authors:  E Helmerhorst; G B Stokes
Journal:  Anal Biochem       Date:  1980-05-01       Impact factor: 3.365

8.  Properties and function of yeast pyruvate carboxylase.

Authors:  M Ruiz-Amil; G De Torrontegui; E Palacián; L Catalina; M Losada
Journal:  J Biol Chem       Date:  1965-09       Impact factor: 5.157

9.  Binding of acetyl-CoA to chicken liver pyruvate carboxylase.

Authors:  W H Frey; M F Utter
Journal:  J Biol Chem       Date:  1977-01-10       Impact factor: 5.157

10.  Activation of yeast pyruvate carboxylase: interactions between acyl coenzyme A compounds, aspartate, and substrates of the reaction.

Authors:  D E Myers; B Tolbert; M F Utter
Journal:  Biochemistry       Date:  1983-10-25       Impact factor: 3.162

View more
  10 in total

Review 1.  Regulation of the structure and activity of pyruvate carboxylase by acetyl CoA.

Authors:  Abdussalam Adina-Zada; Tonya N Zeczycki; Paul V Attwood
Journal:  Arch Biochem Biophys       Date:  2011-11-19       Impact factor: 4.013

2.  Interaction between the biotin carboxyl carrier domain and the biotin carboxylase domain in pyruvate carboxylase from Rhizobium etli.

Authors:  Adam D Lietzan; Ann L Menefee; Tonya N Zeczycki; Sudhanshu Kumar; Paul V Attwood; John C Wallace; W Wallace Cleland; Martin St Maurice
Journal:  Biochemistry       Date:  2011-10-18       Impact factor: 3.162

3.  Inhibitors of Pyruvate Carboxylase.

Authors:  Tonya N Zeczycki; Martin St Maurice; Paul V Attwood
Journal:  Open Enzym Inhib J       Date:  2010

4.  Roles of Arg427 and Arg472 in the binding and allosteric effects of acetyl CoA in pyruvate carboxylase.

Authors:  Abdussalam Adina-Zada; Chutima Sereeruk; Sarawut Jitrapakdee; Tonya N Zeczycki; Martin St Maurice; W Wallace Cleland; John C Wallace; Paul V Attwood
Journal:  Biochemistry       Date:  2012-10-02       Impact factor: 3.162

Review 5.  Structure, mechanism and regulation of pyruvate carboxylase.

Authors:  Sarawut Jitrapakdee; Martin St Maurice; Ivan Rayment; W Wallace Cleland; John C Wallace; Paul V Attwood
Journal:  Biochem J       Date:  2008-08-01       Impact factor: 3.857

6.  A symmetrical tetramer for S. aureus pyruvate carboxylase in complex with coenzyme A.

Authors:  Linda P C Yu; Song Xiang; Gorka Lasso; David Gil; Mikel Valle; Liang Tong
Journal:  Structure       Date:  2009-06-10       Impact factor: 5.006

7.  Mechanisms of inhibition of Rhizobium etli pyruvate carboxylase by L-aspartate.

Authors:  Chaiyos Sirithanakorn; Abdussalam Adina-Zada; John C Wallace; Sarawut Jitrapakdee; Paul V Attwood
Journal:  Biochemistry       Date:  2014-11-06       Impact factor: 3.162

8.  Screening the yeast genome for energetic metabolism pathways involved in a phenotypic response to the anti-cancer agent 3-bromopyruvate.

Authors:  Paweł Lis; Paweł Jurkiewicz; Magdalena Cal-Bąkowska; Young H Ko; Peter L Pedersen; Andre Goffeau; Stanisław Ułaszewski
Journal:  Oncotarget       Date:  2016-03-01

9.  Multi-timescale analysis of a metabolic network in synthetic biology: a kinetic model for 3-hydroxypropionic acid production via beta-alanine.

Authors:  Mohit P Dalwadi; John R King; Nigel P Minton
Journal:  J Math Biol       Date:  2017-11-20       Impact factor: 2.259

10.  Regulation of d-Aspartate Oxidase Gene Expression by Pyruvate Metabolism in the Yeast Cryptococcus humicola.

Authors:  Daiki Imanishi; Sota Zaitsu; Shouji Takahashi
Journal:  Microorganisms       Date:  2021-11-27
  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.