Literature DB >> 17467258

Long-range DNA contacts: romance in the nucleus?

Wouter de Laat1.   

Abstract

Recent studies show that genes far apart on the same chromosome or even on different chromosomes can come together in the nuclear space. It has been hypothesized that functionally related genes 'kiss' at transcription factories to coordinate their expression. Novel high-throughput methods, such as 4C technology, that study DNA interactions in an unbiased manner should uncover the generality of this romantic concept of nuclear architecture.

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Year:  2007        PMID: 17467258     DOI: 10.1016/j.ceb.2007.04.004

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  17 in total

1.  Chromosomes kiss and tell: Long-range chromosome contacts modulate replication termination.

Authors:  Shikha Laloraya
Journal:  Cell Cycle       Date:  2010-11-05       Impact factor: 4.534

2.  A journey into the nucleus. Conference on Nuclear Structure and Dynamics.

Authors:  Irina Solovei; Philippe Pasero; Neus Visa
Journal:  EMBO Rep       Date:  2008-02-15       Impact factor: 8.807

3.  Thermodynamic pathways to genome spatial organization in the cell nucleus.

Authors:  Mario Nicodemi; Antonella Prisco
Journal:  Biophys J       Date:  2009-03-18       Impact factor: 4.033

Review 4.  Transcriptional control of the TNF gene.

Authors:  James V Falvo; Alla V Tsytsykova; Anne E Goldfeld
Journal:  Curr Dir Autoimmun       Date:  2010-02-18

5.  High-resolution analysis of cis-acting regulatory networks at the α-globin locus.

Authors:  Jim R Hughes; Karen M Lower; Ian Dunham; Stephen Taylor; Marco De Gobbi; Jacqueline A Sloane-Stanley; Simon McGowan; Jiannis Ragoussis; Douglas Vernimmen; Richard J Gibbons; Douglas R Higgs
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-05-06       Impact factor: 6.237

6.  Regulation of replication termination by Reb1 protein-mediated action at a distance.

Authors:  Samarendra K Singh; Sarah Sabatinos; Susan Forsburg; Deepak Bastia
Journal:  Cell       Date:  2010-09-17       Impact factor: 41.582

7.  Replication initiation at a distance: determination of the cis- and trans-acting elements of replication origin alpha of plasmid R6K.

Authors:  Mukesh Saxena; Mayuresh Abhyankar; Deepak Bastia
Journal:  J Biol Chem       Date:  2009-12-15       Impact factor: 5.157

8.  Glucocorticoid receptor activation of the Ciz1-Lcn2 locus by long range interactions.

Authors:  Ofir Hakim; Sam John; Jian Qun Ling; Simon C Biddie; Andrew R Hoffman; Gordon L Hager
Journal:  J Biol Chem       Date:  2009-01-05       Impact factor: 5.157

Review 9.  Spatial organization of genes as a component of regulated expression.

Authors:  Dave A Pai; David R Engelke
Journal:  Chromosoma       Date:  2009-08-30       Impact factor: 4.316

10.  Subnuclear compartmentalization of transiently expressed polyadenylated pri-microRNAs: processing at transcription sites or accumulation in SC35 foci.

Authors:  Jan M Pawlicki; Joan A Steitz
Journal:  Cell Cycle       Date:  2009-02-21       Impact factor: 4.534

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