Literature DB >> 17455935

Inter-DNA electrostatics from explicit solvent molecular dynamics simulations.

Alexey Savelyev1, Garegin A Papoian.   

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Year:  2007        PMID: 17455935     DOI: 10.1021/ja070207t

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


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  20 in total

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2.  Counterion condensation theory of attraction between like charges in the absence of multivalent counterions.

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3.  Chemically accurate coarse graining of double-stranded DNA.

Authors:  Alexey Savelyev; Garegin A Papoian
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4.  Roles of DNA looping in enhancer-blocking activity.

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Journal:  Biophys J       Date:  2011-01-05       Impact factor: 4.033

5.  Arc-repressor dimerization on DNA: folding rate enhancement by colocalization.

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Journal:  Biophys J       Date:  2009-05-20       Impact factor: 4.033

6.  Molecular renormalization group coarse-graining of polymer chains: application to double-stranded DNA.

Authors:  Alexey Savelyev; Garegin A Papoian
Journal:  Biophys J       Date:  2009-05-20       Impact factor: 4.033

7.  Molecular modeling of nucleic acid structure: electrostatics and solvation.

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Journal:  Curr Protoc Nucleic Acid Chem       Date:  2001-08

8.  Microscopic basis for the mesoscopic extensibility of dendrimer-compacted DNA.

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Journal:  Biophys J       Date:  2010-03-03       Impact factor: 4.033

Review 9.  Biomolecular electrostatics and solvation: a computational perspective.

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Journal:  Q Rev Biophys       Date:  2012-11       Impact factor: 5.318

10.  Differential stability of DNA crossovers in solution mediated by divalent cations.

Authors:  Péter Várnai; Youri Timsit
Journal:  Nucleic Acids Res       Date:  2010-03-09       Impact factor: 16.971

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