Literature DB >> 1745227

Growth phase-dependent modification of RNA polymerase in Escherichia coli.

M Ozaki1, A Wada, N Fujita, A Ishihama.   

Abstract

During the transition of Escherichia coli cultures from exponential growth to stationary phase, the pre-existing RNA polymerase was found to be converted into at least three different holoenzyme forms, which could be separated by phosphocellulose column chromatography. The relative levels of these three holoenzyme forms changed depending on the phase of cell growth. The altered stationary phase forms of RNA polymerase showed promoter recognition properties that were different from those of the holoenzyme from exponentially growing cells. Enzyme reconstitution experiments showed that the altered promoter selectivity was due to modification of the core enzyme. We propose that modulation of RNA polymerase plays a role in the global switch of gene expression during the transition from exponential growth to stationary phase.

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Year:  1991        PMID: 1745227     DOI: 10.1007/bf00290644

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  17 in total

Review 1.  Structure and function of bacterial sigma factors.

Authors:  J D Helmann; M J Chamberlin
Journal:  Annu Rev Biochem       Date:  1988       Impact factor: 23.643

Review 2.  Promoter selectivity of prokaryotic RNA polymerases.

Authors:  A Ishihama
Journal:  Trends Genet       Date:  1988-10       Impact factor: 11.639

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Authors:  K Kawakami; T Saitoh; A Ishihama
Journal:  Mol Gen Genet       Date:  1979-07-13

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Authors:  N Gonzalez; J Wiggs; M J Chamberlin
Journal:  Arch Biochem Biophys       Date:  1977-08       Impact factor: 4.013

5.  Determination of the promoter strength in the mixed transcription system. II. Promoters of ribosomal RNA, ribosomal protein S1 and recA protein operons from Escherichia coli.

Authors:  M Kajitani; A Ishihama
Journal:  Nucleic Acids Res       Date:  1983-06-25       Impact factor: 16.971

6.  Biosynthesis of RNA polymerase in Escherichia coli. XII. Noncoordinate synthesis of core enzyme subunits after suppression of cell growth.

Authors:  M Enami; A Ishihama
Journal:  Mol Gen Genet       Date:  1982

7.  Heterogeneity of RNA polymerase in Escherichia coli. I. A new holoenzyme containing a new sigma factor.

Authors:  R Fukuda; Y Iwakura; A Ishihama
Journal:  J Mol Biol       Date:  1974-03       Impact factor: 5.469

8.  Structure and probable genetic location of a "ribosome modulation factor" associated with 100S ribosomes in stationary-phase Escherichia coli cells.

Authors:  A Wada; Y Yamazaki; N Fujita; A Ishihama
Journal:  Proc Natl Acad Sci U S A       Date:  1990-04       Impact factor: 11.205

9.  Promoter selectivity of Escherichia coli RNA polymerase. Purification and properties of holoenzyme containing the heat-shock sigma subunit.

Authors:  N Fujita; T Nomura; A Ishihama
Journal:  J Biol Chem       Date:  1987-02-05       Impact factor: 5.157

10.  Division genes in Escherichia coli are expressed coordinately to cell septum requirements by gearbox promoters.

Authors:  M Aldea; T Garrido; J Pla; M Vicente
Journal:  EMBO J       Date:  1990-11       Impact factor: 11.598

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  11 in total

Review 1.  Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase.

Authors:  Regine Hengge-Aronis
Journal:  Microbiol Mol Biol Rev       Date:  2002-09       Impact factor: 11.056

2.  Growth-phase-dependent expression of cspD, encoding a member of the CspA family in Escherichia coli.

Authors:  K Yamanaka; M Inouye
Journal:  J Bacteriol       Date:  1997-08       Impact factor: 3.490

3.  Effect of heat shock on DNA-dependent RNA polymerase from the cyanobacterium Synechococcus sp.

Authors:  O Hammouda
Journal:  Folia Microbiol (Praha)       Date:  1996       Impact factor: 2.099

Review 4.  Stable DNA replication: interplay between DNA replication, homologous recombination, and transcription.

Authors:  T Kogoma
Journal:  Microbiol Mol Biol Rev       Date:  1997-06       Impact factor: 11.056

5.  Identification of sigma factors for growth phase-related promoter selectivity of RNA polymerases from Streptomyces coelicolor A3(2).

Authors:  J G Kang; M Y Hahn; A Ishihama; J H Roe
Journal:  Nucleic Acids Res       Date:  1997-07-01       Impact factor: 16.971

6.  Stimulatory effect of trehalose on formation and activity of Escherichia coli RNA polymerase E sigma38 holoenzyme.

Authors:  S Kusano; A Ishihama
Journal:  J Bacteriol       Date:  1997-06       Impact factor: 3.490

7.  Promoter determinants for Escherichia coli RNA polymerase holoenzyme containing sigma 38 (the rpoS gene product).

Authors:  K Tanaka; S Kusano; N Fujita; A Ishihama; H Takahashi
Journal:  Nucleic Acids Res       Date:  1995-03-11       Impact factor: 16.971

8.  Heterogeneity of the principal sigma factor in Escherichia coli: the rpoS gene product, sigma 38, is a second principal sigma factor of RNA polymerase in stationary-phase Escherichia coli.

Authors:  K Tanaka; Y Takayanagi; N Fujita; A Ishihama; H Takahashi
Journal:  Proc Natl Acad Sci U S A       Date:  1993-04-15       Impact factor: 11.205

9.  Major stable peptides of Yersinia pestis synthesized during the low-calcium response.

Authors:  R J Mehigh; R R Braubaker
Journal:  Infect Immun       Date:  1993-01       Impact factor: 3.441

10.  Regulation of the Escherichia coli rmf gene encoding the ribosome modulation factor: growth phase- and growth rate-dependent control.

Authors:  M Yamagishi; H Matsushima; A Wada; M Sakagami; N Fujita; A Ishihama
Journal:  EMBO J       Date:  1993-02       Impact factor: 11.598

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