Literature DB >> 17452033

Structural features of the ligand binding site on human complement protein C8gamma: a member of the lipocalin family.

Brian Chiswell1, Leslie L Lovelace, Charity Brannen, Eric A Ortlund, Lukasz Lebioda, James M Sodetz.   

Abstract

Human C8 is one of five components of the cytolytic membrane attack complex of complement. It contains three subunits (C8alpha, C8beta, C8gamma) arranged as a disulfide-linked C8alpha-gamma heterodimer that is noncovalently associated with C8beta. C8gamma has the distinction of being the only lipocalin in the complement system. Lipocalins have a core beta-barrel structure forming a calyx with a binding site for a small hydrophobic ligand. A natural ligand for C8gamma has not been identified; however previous structural studies indicate C8gamma has a typical lipocalin fold that is suggestive of a ligand-binding capability. A distinctive feature of C8gamma is the division of its putative ligand binding pocket into a hydrophilic upper portion and a large hydrophobic lower cavity. Access to the latter is restricted by the close proximity of two tyrosine side chains (Y83 and Y131). In the present study, binding experiments were performed using lauric acid as a pseudoligand to investigate the potential accessibility of the lower cavity. The crystal structure of a C8gamma.laurate complex revealed that Y83 and Y131 can move to allow penetration of the hydrocarbon chain of laurate into the lower cavity. Introducing a Y83W mutation blocked access but had no effect on the ability of C8gamma to enhance C8 cytolytic activity. Together, these results indicate that the lower cavity in C8gamma could accommodate a ligand if such a ligand has a narrow hydrophobic moiety at one end. Entry of that moiety into the lower cavity would require movement of Y83 and Y131, which act as a gate at the cavity entrance.

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Year:  2007        PMID: 17452033     DOI: 10.1016/j.bbapap.2007.03.004

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  5 in total

1.  A new crystal form of human tear lipocalin reveals high flexibility in the loop region and induced fit in the ligand cavity.

Authors:  Daniel A Breustedt; Lorenz Chatwell; Arne Skerra
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-09-16

2.  Crystal structure of the MACPF domain of human complement protein C8 alpha in complex with the C8 gamma subunit.

Authors:  Daniel J Slade; Leslie L Lovelace; Maksymilian Chruszcz; Wladek Minor; Lukasz Lebioda; James M Sodetz
Journal:  J Mol Biol       Date:  2008-04-03       Impact factor: 5.469

3.  Binding Characteristics of Sphingosine-1-Phosphate to ApoM hints to Assisted Release Mechanism via the ApoM Calyx-Opening.

Authors:  Hansi Zhang; Kristyna Pluhackova; Zhenyan Jiang; Rainer A Böckmann
Journal:  Sci Rep       Date:  2016-08-01       Impact factor: 4.379

Review 4.  The mystery behind membrane insertion: a review of the complement membrane attack complex.

Authors:  Charles Bayly-Jones; Doryen Bubeck; Michelle A Dunstone
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-08-05       Impact factor: 6.237

Review 5.  Update on the human and mouse lipocalin (LCN) gene family, including evidence the mouse Mup cluster is result of an "evolutionary bloom".

Authors:  Georgia Charkoftaki; Yewei Wang; Monica McAndrews; Elspeth A Bruford; David C Thompson; Vasilis Vasiliou; Daniel W Nebert
Journal:  Hum Genomics       Date:  2019-02-19       Impact factor: 4.639

  5 in total

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