Literature DB >> 17450722

[ISSR analysis on genetic diversity of endangered relic shrub Sinocalycanthus chinensis].

Ze-xin Jin1, Jun-min Li.   

Abstract

By using inter-simple sequence repeat (ISSR) markers technique, this paper studied the genetic diversity of ten populations of endangered relic shrub Sinocalycanthus chinensis. The results showed that at species level, the percentage of polymorphic loci (P) was 73. 08% , Shannon' s index (h) was 0. 3097, and Nei' s gene diversity (I) was 0. 1987, indicating a high level of genetic diversity, but at population level, they were 23. 65% , 0. 1251 and 0. 0839, respectively, suggesting a low level of genetic diversity. The analysis of molecular variance (AMOVA) demonstrated that there was a relatively high level (57. 11% ) genetic variation among the populations, with the gene differentiation coefficient ( Gst ) and gene flow being 0. 5779 and 0. 3651, respectively. The high genetic differentiation among populations and the low genetic diversity within populations could be attributed to the habitat fragmentation and the limited gene flow among populations. Through cluster analysis, the ten populations of S. chinensis were classified into two groups, with the eight populations in Lin' an City forming a group and other two in Tiantai County forming another group.

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Year:  2007        PMID: 17450722

Source DB:  PubMed          Journal:  Ying Yong Sheng Tai Xue Bao        ISSN: 1001-9332


  3 in total

1.  Genetic structure of endangered Emmenopterys henryi Oliv. based on ISSR polymorphism and implications for its conservation.

Authors:  Jun-Min Li; Ze-Xin Jin
Journal:  Genetica       Date:  2007-09-08       Impact factor: 1.082

2.  Genetic variation in safflower (Carthamus tinctorious L.) for seed quality-related traits and inter-simple sequence repeat (ISSR) markers.

Authors:  Pooran Golkar; Ahmad Arzani; Abdolmajid M Rezaei
Journal:  Int J Mol Sci       Date:  2011-04-19       Impact factor: 5.923

3.  Characterization of 31 microsatellite markers for Sinocalycanthus chinensis (Calycanthaceae), an endemic endangered species.

Authors:  Xiao-Yan Wang; Ze-Xin Jin; Jian-Hui Li; Yuan-Yuan Li
Journal:  Appl Plant Sci       Date:  2017-09-29       Impact factor: 1.936

  3 in total

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