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Literature DB >> 17450148

A yeast two-hybrid smart-pool-array system for protein-interaction mapping.

Fulai Jin¹, Larisa Avramova, Jing Huang, Tony Hazbun.

Abstract

We present here a new two-hybrid smart pool array (SPA) system in which, instead of individual activation domain strains, well-designed activation domain pools are screened in an array format that allows built-in replication and prey-bait deconvolution. Using this method, a Saccharomyces cerevisiae genome SPA increases yeast two-hybrid screening efficiency by an order of magnitude.

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Year: 2007 PMID： 17450148 PMCID： PMC2771206 DOI： 10.1038/nmeth1042

Source DB: PubMed Journal: Nat Methods ISSN： 1548-7091 Impact factor: 28.547

15 in total

1. Detecting protein function and protein-protein interactions from genome sequences.

Authors: E M Marcotte; M Pellegrini; H L Ng; D W Rice; T O Yeates; D Eisenberg
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Review 3. Network biology: understanding the cell's functional organization.

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Review 4. Microarrays to characterize protein interactions on a whole-proteome scale.

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5. A strategy for constructing large protein interaction maps using the yeast two-hybrid system: regulated expression arrays and two-phase mating.

Authors: Jinhui Zhong; Huamei Zhang; Clement A Stanyon; Gerard Tromp; Russell L Finley
Journal: Genome Res Date: 2003-11-12 Impact factor: 9.043

6. A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae.

Authors: P Uetz; L Giot; G Cagney; T A Mansfield; R S Judson; J R Knight; D Lockshon; V Narayan; M Srinivasan; P Pochart; A Qureshi-Emili; Y Li; B Godwin; D Conover; T Kalbfleisch; G Vijayadamodar; M Yang; M Johnston; S Fields; J M Rothberg
Journal: Nature Date: 2000-02-10 Impact factor: 49.962

7. A yeast genetic system for selecting small molecule inhibitors of protein-protein interactions in nanodroplets.

Authors: J Huang; S L Schreiber
Journal: Proc Natl Acad Sci U S A Date: 1997-12-09 Impact factor: 11.205

8. On the number of protein-protein interactions in the yeast proteome.

Authors: Andrei Grigoriev
Journal: Nucleic Acids Res Date: 2003-07-15 Impact factor: 16.971

9. Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.

Authors: Nevan J Krogan; Gerard Cagney; Haiyuan Yu; Gouqing Zhong; Xinghua Guo; Alexandr Ignatchenko; Joyce Li; Shuye Pu; Nira Datta; Aaron P Tikuisis; Thanuja Punna; José M Peregrín-Alvarez; Michael Shales; Xin Zhang; Michael Davey; Mark D Robinson; Alberto Paccanaro; James E Bray; Anthony Sheung; Bryan Beattie; Dawn P Richards; Veronica Canadien; Atanas Lalev; Frank Mena; Peter Wong; Andrei Starostine; Myra M Canete; James Vlasblom; Samuel Wu; Chris Orsi; Sean R Collins; Shamanta Chandran; Robin Haw; Jennifer J Rilstone; Kiran Gandi; Natalie J Thompson; Gabe Musso; Peter St Onge; Shaun Ghanny; Mandy H Y Lam; Gareth Butland; Amin M Altaf-Ul; Shigehiko Kanaya; Ali Shilatifard; Erin O'Shea; Jonathan S Weissman; C James Ingles; Timothy R Hughes; John Parkinson; Mark Gerstein; Shoshana J Wodak; Andrew Emili; Jack F Greenblatt
Journal: Nature Date: 2006-03-22 Impact factor: 49.962

10. Assigning function to yeast proteins by integration of technologies.

Authors: Tony R Hazbun; Lars Malmström; Scott Anderson; Beth J Graczyk; Bethany Fox; Michael Riffle; Bryan A Sundin; J Derringer Aranda; W Hayes McDonald; Chun-Hwei Chiu; Brian E Snydsman; Phillip Bradley; Eric G D Muller; Stanley Fields; David Baker; John R Yates; Trisha N Davis
Journal: Mol Cell Date: 2003-12 Impact factor: 17.970

6 in total

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Authors: Bram Stynen; Hélène Tournu; Jan Tavernier; Patrick Van Dijck
Journal: Microbiol Mol Biol Rev Date: 2012-06 Impact factor: 11.056

2. High throughput flow cytometry based yeast two-hybrid array approach for large-scale analysis of protein-protein interactions.

Authors: Jun Chen; Mark B Carter; Bruce S Edwards; Hong Cai; Larry A Sklar
Journal: Cytometry A Date: 2011-09-27 Impact factor: 4.355