Literature DB >> 17447011

Protein-protein interaction site mapping using NMR-detected mutational scanning.

Bettina Baminger1, Martin L Ludwiczek, Georg Kontaxis, Stefan Knapp, Robert Konrat.   

Abstract

We demonstrate a novel NMR method for the mapping of protein-protein interaction sites. In our approach protein-protein binding sites are mapped by competition binding experiments using indirect NMR reporter technology and Ala positional scanning. The methodology provides high sensitivity, ease of implementation and high-throughput capabilities. The feasibility of the technique is demonstrated with an application to the beta-Catenin/Tcf4 complex.

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Year:  2007        PMID: 17447011     DOI: 10.1007/s10858-007-9154-x

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  20 in total

Review 1.  Wnt signaling in oncogenesis and embryogenesis--a look outside the nucleus.

Authors:  M Peifer; P Polakis
Journal:  Science       Date:  2000-03-03       Impact factor: 47.728

Review 2.  Mapping protein-protein interactions in solution by NMR spectroscopy.

Authors:  Erik R P Zuiderweg
Journal:  Biochemistry       Date:  2002-01-08       Impact factor: 3.162

3.  Hot spots in beta-catenin for interactions with LEF-1, conductin and APC.

Authors:  J P von Kries; G Winbeck; C Asbrand; T Schwarz-Romond; N Sochnikova; A Dell'Oro; J Behrens; W Birchmeier
Journal:  Nat Struct Biol       Date:  2000-09

Review 4.  Measuring protein-protein interactions.

Authors:  J H Lakey; E M Raggett
Journal:  Curr Opin Struct Biol       Date:  1998-02       Impact factor: 6.809

5.  XTcf-3 transcription factor mediates beta-catenin-induced axis formation in Xenopus embryos.

Authors:  M Molenaar; M van de Wetering; M Oosterwegel; J Peterson-Maduro; S Godsave; V Korinek; J Roose; O Destrée; H Clevers
Journal:  Cell       Date:  1996-08-09       Impact factor: 41.582

6.  MOLMOL: a program for display and analysis of macromolecular structures.

Authors:  R Koradi; M Billeter; K Wüthrich
Journal:  J Mol Graph       Date:  1996-02

Review 7.  A versatile transcriptional effector of Wingless signaling.

Authors:  R Nusse
Journal:  Cell       Date:  1997-05-02       Impact factor: 41.582

8.  Tcf4 can specifically recognize beta-catenin using alternative conformations.

Authors:  T A Graham; D M Ferkey; F Mao; D Kimelman; W Xu
Journal:  Nat Struct Biol       Date:  2001-12

Review 9.  The Yin-Yang of TCF/beta-catenin signaling.

Authors:  N Barker; P J Morin; H Clevers
Journal:  Adv Cancer Res       Date:  2000       Impact factor: 6.242

10.  Three-dimensional structure of the armadillo repeat region of beta-catenin.

Authors:  A H Huber; W J Nelson; W I Weis
Journal:  Cell       Date:  1997-09-05       Impact factor: 41.582

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  2 in total

1.  E9-Im9 colicin DNase-immunity protein biomolecular association in water: a multiple-copy and accelerated molecular dynamics simulation study.

Authors:  Riccardo Baron; Sergio E Wong; Cesar A F de Oliveira; J Andrew McCammon
Journal:  J Phys Chem B       Date:  2008-12-25       Impact factor: 2.991

2.  Toward rational fragment-based lead design without 3D structures.

Authors:  Morkos A Henen; Nicolas Coudevylle; Leonhard Geist; Robert Konrat
Journal:  J Med Chem       Date:  2012-08-30       Impact factor: 7.446

  2 in total

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