Literature DB >> 17446117

Druggability of human disease genes.

Meena Kishore Sakharkar1, Kishore Ramaji Sakharkar, Shazib Pervaiz.   

Abstract

The availability of complete genome sequences and the wealth of large-scale biological datasets provide an unprecedented opportunity to elucidate the genetic basis of human diseases. Here we use integrative in silico approaches to provide an accurate description of gene functions to a set of 1737 highly curated disease genes in the human genome. This analysis is the first attempt on in silico identification of druggable domains within disease genes. We provide information on gene architecture and function, druggability in the context of available drugs, and evolutionary conservation across 38 model eukaryotic genomes. These data could serve as a useful compendium for integrated information on disease genes with the potential for exploring pharmaceutically exploitable targets. Our analyses underscore the utility of large genomic databases for in silico systematic drug target identification in the post-genomic era.

Entities:  

Mesh:

Year:  2007        PMID: 17446117     DOI: 10.1016/j.biocel.2007.02.018

Source DB:  PubMed          Journal:  Int J Biochem Cell Biol        ISSN: 1357-2725            Impact factor:   5.085


  13 in total

1.  The Evolving Druggability and Developability Space: Chemically Modified New Modalities and Emerging Small Molecules.

Authors:  Wenzhan Yang; Prajakta Gadgil; Venkata R Krishnamurthy; Margaret Landis; Pankajini Mallick; Dipal Patel; Phenil J Patel; Darren L Reid; Manuel Sanchez-Felix
Journal:  AAPS J       Date:  2020-01-03       Impact factor: 4.009

Review 2.  Identifying druggable disease-modifying gene products.

Authors:  Scott J Dixon; Brent R Stockwell
Journal:  Curr Opin Chem Biol       Date:  2009-09-07       Impact factor: 8.822

3.  Signalogs: orthology-based identification of novel signaling pathway components in three metazoans.

Authors:  Tamás Korcsmáros; Máté S Szalay; Petra Rovó; Robin Palotai; Dávid Fazekas; Katalin Lenti; Illés J Farkas; Péter Csermely; Tibor Vellai
Journal:  PLoS One       Date:  2011-05-03       Impact factor: 3.240

4.  Identifying druggable targets by protein microenvironments matching: application to transcription factors.

Authors:  T Liu; R B Altman
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2014-01-22

5.  Micro-Environmental Signature of The Interactions between Druggable Target Protein, Dipeptidyl Peptidase-IV, and Anti-Diabetic Drugs.

Authors:  Chiranjib Chakraborty; Bidyut Mallick; Ashish Ranjan Sharma; Garima Sharma; Supriya Jagga; C George Priya Doss; Ju-Suk Nam; Sang-Soo Lee
Journal:  Cell J       Date:  2016-12-21       Impact factor: 2.479

Review 6.  Human genomic diversity, viral genomics and proteomics, as exemplified by human papillomaviruses and H5N1 influenza viruses.

Authors:  Meena K Sakharkar; Kishore R Sakharkar; Vincent T K Chow
Journal:  Hum Genomics       Date:  2009-07       Impact factor: 4.639

7.  Quantitative analysis on the characteristics of targets with FDA approved drugs.

Authors:  Meena K Sakharkar; Peng Li; Zhaowei Zhong; Kishore R Sakharkar
Journal:  Int J Biol Sci       Date:  2007-12-10       Impact factor: 6.580

8.  Identification of novel therapeutics for complex diseases from genome-wide association data.

Authors:  Mani P Grover; Sara Ballouz; Kaavya A Mohanasundaram; Richard A George; Craig D H Sherman; Tamsyn M Crowley; Merridee A Wouters
Journal:  BMC Med Genomics       Date:  2014-05-08       Impact factor: 3.063

9.  Evolutionary rescue by compensatory mutations is constrained by genomic and environmental backgrounds.

Authors:  Marie Filteau; Véronique Hamel; Marie-Christine Pouliot; Isabelle Gagnon-Arsenault; Alexandre K Dubé; Christian R Landry
Journal:  Mol Syst Biol       Date:  2015-10-12       Impact factor: 11.429

10.  A drug target slim: using gene ontology and gene ontology annotations to navigate protein-ligand target space in ChEMBL.

Authors:  Prudence Mutowo; A Patrícia Bento; Nathan Dedman; Anna Gaulton; Anne Hersey; Jane Lomax; John P Overington
Journal:  J Biomed Semantics       Date:  2016-09-27
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.