Literature DB >> 17442792

Identification of genotypically diverse Cryptococcus neoformans and Cryptococcus gattii isolates by Luminex xMAP technology.

M Bovers1, M R Diaz, F Hagen, L Spanjaard, B Duim, C E Visser, H L Hoogveld, J Scharringa, I M Hoepelman, J W Fell, T Boekhout.   

Abstract

A Luminex suspension array, which had been developed for identification of Cryptococcus neoformans and Cryptococcus gattii isolates, was tested by genotyping a set of 58 mostly clinical isolates. All genotypes of C. neoformans and C. gattii were included. In addition, cerebrospinal fluid (CSF) obtained from patients with cryptococcal meningitis was used to investigate the feasibility of the technique for identification of the infecting strain. The suspension array correctly identified haploid isolates in all cases. Furthermore, hybrid isolates possessing two alleles of the Luminex probe region could be identified as hybrids. In CSF specimens, the genotype of the cryptococcal strains responsible for infection could be identified after optimization of the PCR conditions. However, further optimization of the DNA extraction protocol is needed to enhance the usability of the method in clinical practice.

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Year:  2007        PMID: 17442792      PMCID: PMC1933031          DOI: 10.1128/JCM.00223-07

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  29 in total

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2.  Multispecies outbreak of cryptococcosis on southern Vancouver Island, British Columbia.

Authors:  Craig Stephen; S Lester; W Black; M Fyfe; Stephen Raverty
Journal:  Can Vet J       Date:  2002-10       Impact factor: 1.008

3.  Quantitative, multiplexed detection of bacterial pathogens: DNA and protein applications of the Luminex LabMAP system.

Authors:  Sherry A Dunbar; Coe A Vander Zee; Kerry G Oliver; Kevin L Karem; James W Jacobson
Journal:  J Microbiol Methods       Date:  2003-05       Impact factor: 2.363

4.  Molecular sequence analyses of the intergenic spacer (IGS) associated with rDNA of the two varieties of the pathogenic yeast, Cryptococcus neoformans.

Authors:  M R Diaz; T Boekhout; B Theelen; J W Fell
Journal:  Syst Appl Microbiol       Date:  2000-12       Impact factor: 4.022

5.  PCR-restriction fragment length polymorphism analysis of the phospholipase B (PLB1) gene for subtyping of Cryptococcus neoformans isolates.

Authors:  G Nicolas Latouche; Matthew Huynh; Tania C Sorrell; Wieland Meyer
Journal:  Appl Environ Microbiol       Date:  2003-04       Impact factor: 4.792

6.  Multiple gene genealogies reveal recent dispersion and hybridization in the human pathogenic fungus Cryptococcus neoformans.

Authors:  J Xu; R Vilgalys; T G Mitchell
Journal:  Mol Ecol       Date:  2000-10       Impact factor: 6.185

7.  Luminex detection of fecal indicators in river samples, marine recreational water, and beach sand.

Authors:  Iliana B Baums; Kelly D Goodwin; Traci Kiesling; David Wanless; Mara R Diaz; Jack W Fell
Journal:  Mar Pollut Bull       Date:  2007-03-09       Impact factor: 5.553

8.  Hybrid genotypes in the pathogenic yeast Cryptococcus neoformans.

Authors:  Teun Boekhout; Bart Theelen; Mara Diaz; Jack W Fell; Wim C J Hop; Edwin C A Abeln; Françoise Dromer; Wieland Meyer
Journal:  Microbiology       Date:  2001-04       Impact factor: 2.777

9.  Molecular typing of IberoAmerican Cryptococcus neoformans isolates.

Authors:  Wieland Meyer; Alexandra Castañeda; Stuart Jackson; Matthew Huynh; Elizabeth Castañeda
Journal:  Emerg Infect Dis       Date:  2003-02       Impact factor: 6.883

10.  First report of Cryptococcus neoformans var. gattii serotype B from Greece.

Authors:  A Velegraki; V G Kiosses; H Pitsouni; D Toukas; V D Daniilidis; N J Legakis
Journal:  Med Mycol       Date:  2001-10       Impact factor: 4.076

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  18 in total

1.  Rapid differentiation of cryptic species within Cryptococcus gattii by a duplex PCR assay.

Authors:  Xiaobo Feng; Xiaohua Fu; Bo Ling; Lei Wang; Wanqing Liao; Weihua Pan; Zhirong Yao
Journal:  J Clin Microbiol       Date:  2013-07-03       Impact factor: 5.948

Review 2.  Multilocus sequence typing of pathogenic Candida species.

Authors:  Frank C Odds; Mette D Jacobsen
Journal:  Eukaryot Cell       Date:  2008-05-02

3.  Using oligonucleotide suspension arrays for laboratory identification of bacteria responsible for bacteremia.

Authors:  Xiao-li Hou; Han-liang Jiang; Qing-yi Cao; Li-ying Zhao; Barbara J Chang; Zhi Chen
Journal:  J Zhejiang Univ Sci B       Date:  2008-04       Impact factor: 3.066

4.  Evaluation of Pyrosequencing technology for the identification of clinically relevant non-dematiaceous yeasts and related species.

Authors:  C I Montero; Y R Shea; P A Jones; S M Harrington; N E Tooke; F G Witebsky; P R Murray
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2008-04-18       Impact factor: 3.267

5.  Development of a Luminex-based multiplex assay for detection of mutations conferring resistance to Echinocandins in Candida glabrata.

Authors:  Cau D Pham; Carol B Bolden; Randall J Kuykendall; Shawn R Lockhart
Journal:  J Clin Microbiol       Date:  2013-12-18       Impact factor: 5.948

Review 6.  Cryptococcus gattii infections.

Authors:  Sharon C-A Chen; Wieland Meyer; Tania C Sorrell
Journal:  Clin Microbiol Rev       Date:  2014-10       Impact factor: 26.132

7.  Rapid identification of Cryptococcus neoformans var. grubii, C. neoformans var. neoformans, and C. gattii by use of rapid biochemical tests, differential media, and DNA sequencing.

Authors:  Lisa McTaggart; Susan E Richardson; Christine Seah; Linda Hoang; Annette Fothergill; Sean X Zhang
Journal:  J Clin Microbiol       Date:  2011-05-18       Impact factor: 5.948

8.  Rapid differentiation of phenotypically similar yeast species by single-strand conformation polymorphism analysis of ribosomal DNA.

Authors:  Qi-Ming Wang; Juan Li; Shi-An Wang; Feng-Yan Bai
Journal:  Appl Environ Microbiol       Date:  2008-03-14       Impact factor: 4.792

9.  Evaluation of a multianalyte profiling assay and an enzyme-linked immunosorbent assay for serological examination of Epstein-Barr virus-specific antibody responses in diagnosis of nasopharyngeal carcinoma.

Authors:  Ai-Di Gu; Hao-Yuan Mo; Yan-Bo Xie; Rou-Jun Peng; Jin-Xin Bei; Juan Peng; Miao-Yan Li; Li-Zhen Chen; Qi-Sheng Feng; Wei-Hua Jia; Yi-Xin Zeng
Journal:  Clin Vaccine Immunol       Date:  2008-09-03

10.  Identification of Cryptococcus gattii by use of L-canavanine glycine bromothymol blue medium and DNA sequencing.

Authors:  K R Klein; L Hall; S M Deml; J M Rysavy; S L Wohlfiel; N L Wengenack
Journal:  J Clin Microbiol       Date:  2009-09-30       Impact factor: 5.948

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