Literature DB >> 17442254

Capture of genomic DNA on glass microscope slides.

Oliver Z Nanassy1, Paul V Haydock, Michael W Reed.   

Abstract

It is well known that DNA strands bind to silica surfaces in the presence of high concentrations of chaotropic salts. We developed simple methods to evaluate binding and recovery of DNA on flat glass microscope slides and compared their properties with commercially available silica "spin columns". Surprisingly, genomic DNA was recovered efficiently from untreated glass slides. Binding and elution times from glass slides were optimized in experiments with DNA samples of various sizes and defined buffers. Average DNA recovery from 500 ng of input genomic DNA varied from 25 to 53% for the glass slide protocol. Yields were comparable to those of spin columns. Human serum albumin and plasma components decreased DNA binding to glass several-fold in a concentration-dependent manner. These results support the concept of using flat glass slides as DNA purification surfaces in microfluidic devices for PCR sample preparation.

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Year:  2007        PMID: 17442254      PMCID: PMC1955222          DOI: 10.1016/j.ab.2007.03.017

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  11 in total

1.  Evaluation of silica resins for direct and efficient extraction of DNA from complex biological matrices in a miniaturized format.

Authors:  H Tian; A F Hühmer; J P Landers
Journal:  Anal Biochem       Date:  2000-08-01       Impact factor: 3.365

2.  Microchip-based purification of DNA from biological samples.

Authors:  Michael C Breadmore; Kelley A Wolfe; Imee G Arcibal; Wayne K Leung; Dana Dickson; Braden C Giordano; Mary E Power; Jerome P Ferrance; Sanford H Feldman; Pamela M Norris; James P Landers
Journal:  Anal Chem       Date:  2003-04-15       Impact factor: 6.986

3.  Nucleic acid purification using microfabricated silicon structures.

Authors:  Nathaniel C Cady; Scott Stelick; Carl A Batt
Journal:  Biosens Bioelectron       Date:  2003-10-30       Impact factor: 10.618

Review 4.  Diagnostics for the developing world.

Authors:  David Mabey; Rosanna W Peeling; Andrew Ustianowski; Mark D Perkins
Journal:  Nat Rev Microbiol       Date:  2004-03       Impact factor: 60.633

Review 5.  PCR microfluidic devices for DNA amplification.

Authors:  Chunsun Zhang; Jinliang Xu; Wenli Ma; Wenling Zheng
Journal:  Biotechnol Adv       Date:  2005-12-02       Impact factor: 14.227

Review 6.  Microfluidic diagnostic technologies for global public health.

Authors:  Paul Yager; Thayne Edwards; Elain Fu; Kristen Helton; Kjell Nelson; Milton R Tam; Bernhard H Weigl
Journal:  Nature       Date:  2006-07-27       Impact factor: 49.962

Review 7.  Lab-on-a-chip: microfluidics in drug discovery.

Authors:  Petra S Dittrich; Andreas Manz
Journal:  Nat Rev Drug Discov       Date:  2006-03       Impact factor: 84.694

8.  Preparative and analytical purification of DNA from agarose.

Authors:  B Vogelstein; D Gillespie
Journal:  Proc Natl Acad Sci U S A       Date:  1979-02       Impact factor: 11.205

9.  Fabrication of amino silane-coated microchip for DNA extraction from whole blood.

Authors:  Takahito Nakagawa; Tsuyoshi Tanaka; Daisuke Niwa; Tetsuya Osaka; Haruko Takeyama; Tadashi Matsunaga
Journal:  J Biotechnol       Date:  2004-11-30       Impact factor: 3.307

10.  Thermoplastic microfluidic device for on-chip purification of nucleic acids for disposable diagnostics.

Authors:  Arpita Bhattacharyya; Catherine M Klapperich
Journal:  Anal Chem       Date:  2006-02-01       Impact factor: 6.986

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  3 in total

1.  Extraction of MS2 phage RNA from upper respiratory tract specimens by use of flat glass devices.

Authors:  Oliver Z Nanassy; Paul Haydock; Nicola Beck; Lynn M Barker; Perry Hargrave; Daniel Gestwick; Wesley C Lindsey; Michael W Reed; J Scott Meschke
Journal:  J Clin Microbiol       Date:  2010-12-29       Impact factor: 5.948

2.  The Glass Slide Extraction System Snap Card Improves Non-Invasive Prenatal Genotyping in Pregnancies with Antibodies.

Authors:  Thomasz Adamczyk; Andrea Doescher; Paul V Haydock; Russ Aldrich; Eduard K Petershofen; Thomas H Müller
Journal:  Transfus Med Hemother       Date:  2015-10-26       Impact factor: 3.747

3.  Rosuvastatin revert memory impairment and anxiogenic-like effect in mice infected with the chronic ME-49 strain of Toxoplasma gondii.

Authors:  Fernanda Ferreira Evangelista; Willian Costa-Ferreira; Francini Martini Mantelo; Lucimara Fátima Beletini; Amanda Hinobu de Souza; Priscilla de Laet Sant'Ana; Keller Karla de Lima; Carlos Cesar Crestani; Ana Lúcia Falavigna-Guilherme
Journal:  PLoS One       Date:  2021-04-15       Impact factor: 3.240

  3 in total

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