Literature DB >> 17440219

Phase sensitivity analysis of circadian rhythm entrainment.

Rudiyanto Gunawan1, Francis J Doyle.   

Abstract

As a biological clock, circadian rhythms evolve to accomplish a stable (robust) entrainment to environmental cycles, of which light is the most obvious. The mechanism of photic entrainment is not known, but two models of entrainment have been proposed based on whether light has a continuous (parametric) or discrete (nonparametric) effect on the circadian pacemaker. A novel sensitivity analysis is developed to study the circadian entrainment in silico based on a limit cycle approach and applied to a model of Drosophila circadian rhythm. The comparative analyses of complete and skeleton photoperiods suggest a trade-off between the contribution of period modulation (parametric effect) and phase shift (nonparametric effect) in Drosophila circadian entrainment. The results also give suggestions for an experimental study to (in)validate the two models of entrainment.

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Year:  2007        PMID: 17440219     DOI: 10.1177/0748730407299194

Source DB:  PubMed          Journal:  J Biol Rhythms        ISSN: 0748-7304            Impact factor:   3.182


  6 in total

1.  Robust entrainment of circadian oscillators requires specific phase response curves.

Authors:  Benjamin Pfeuty; Quentin Thommen; Marc Lefranc
Journal:  Biophys J       Date:  2011-06-08       Impact factor: 4.033

2.  Tuning the phase of circadian entrainment.

Authors:  Grigory Bordyugov; Ute Abraham; Adrian Granada; Pia Rose; Katharina Imkeller; Achim Kramer; Hanspeter Herzel
Journal:  J R Soc Interface       Date:  2015-07-06       Impact factor: 4.118

3.  Adiponectin fine-tuning of liver regeneration dynamics revealed through cellular network modelling.

Authors:  Jason M Correnti; Daniel Cook; Edita Aksamitiene; Aditi Swarup; Babatunde Ogunnaike; Rajanikanth Vadigepalli; Jan B Hoek
Journal:  J Physiol       Date:  2015-01-15       Impact factor: 5.182

4.  Robustness from flexibility in the fungal circadian clock.

Authors:  Ozgur E Akman; David A Rand; Paul E Brown; Andrew J Millar
Journal:  BMC Syst Biol       Date:  2010-06-24

5.  Understanding dynamics using sensitivity analysis: caveat and solution.

Authors:  Thanneer M Perumal; Rudiyanto Gunawan
Journal:  BMC Syst Biol       Date:  2011-03-15

6.  A test of highly optimized tolerance reveals fragile cell-cycle mechanisms are molecular targets in clinical cancer trials.

Authors:  Satyaprakash Nayak; Saniya Salim; Deyan Luan; Michael Zai; Jeffrey D Varner
Journal:  PLoS One       Date:  2008-04-23       Impact factor: 3.240

  6 in total

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